Rhipicephalus microplus (southern cattle tick): 119166850
Help
Entry
119166850 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04517
IgSF CAM signaling
rmp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119166850
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119166850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rmp04812
]
119166850
Cytoskeleton proteins [BR:
rmp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119166850
Intermediate filaments
Intermediate filament-binding proteins
119166850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
119166850
NCBI-ProteinID:
XP_037274121
LinkDB
All DBs
Position
4:complement(46315722..46374821)
Genome browser
AA seq
2387 aa
AA seq
DB search
MTTDISVGLRWDPSTTNAQEMDDYDYDGGNSSSRLFERSRIKALAEEREMVQRKTFCKWV
NSHLVRANCRITDLTTDMRDGKMLIKLLEILSGEKLQKPTKGKMKIHCLENVDKALTFLK
EQRVHLENLGSHDIVDGNSRLTLGLIWTIILRFQIQDITIEQVDNQETKSAKDALLLWCQ
MKTAGYPNVNVRNFTTSWRDGLAFNALIHKHRPDLIQYDKLSRSNAIYNLNNAFTTAEQK
LGLTRLLDPEDVFVDNPDEKSIITYVVTYYHYFSKMKAETVQGKRIGKVIGHAMENERMI
AEYEGLTSDLLRWIEETIVALSDRHFANSLVGVQQQLLAFNAYRTTEKPVKFEEKGNLEV
LLFALQSRLRANNQRPYTPREGRLLADTNRAWERLEKAEHERELALREELIRQEKLEQLA
ARFDRKAGMRETWLAENQRLVSQDNFGQDLASAQAAAKKHEAIETDILAYEERVQAVLAV
ARELETEGYHDVDRINARKDNVLRLWNYLLELLRGRRARLEACLQLQQGLQEMLYIVDAM
EELKARLAVSDLGQHLMGVEDLLQKHSLLEADVNVLGERVRAAVAQAPADPLVAERVKQL
EEAYAELLALATERRRRLEDSRRLWQFYWDMAEEQAWIEEKDRILSSLELGHDLTMVHLL
ISKNKAMEDELAAHEQQLQAVIRSGESLAAEGTPGSERVAERSAEVLAAWDRLRQLQAQR
AERLAKALDFHQFFADADDVDTWMLDTLMLVSSDDVGRDEANVQSLLKKHKEVMEELKSY
AQAIDALHAQAGALAERESPAVLERLASIDRRYKDLLDLGRLRKQRLLDALSLHTLLNEA
DGVHQWIEEKNKMLDSMVLTKDAEDTEVMRHRFEGFEQEMNSSASRVAVVNQLARQLLSV
EHPNAEEVLAKQNSLNQSWASLRDAAEKKRDNISSAHGVQTFHVECRETITWIEEKTKLL
RATEDLGDDLTGIMTLQRRLSGMERDLAAIQAKLDALDKEADRIKQEHPEEAEAIQERIL
QIKAVWEQLTQLLKERDAKLEEAGDLHRFLRDLDHFQAWLTXTQTEIASEDEPTTLQEAE
RLLEQHRLIRQEVDNYTDDYTKMMEYGERITSDAADEDPQFMFLRERLRALRDGWAELRQ
MWENRQALLSQSLNLQLFQRDAKQAEVLLSRQEHHLAKDEQPASLEQVEDLIKRHEAFLT
TMEANDEKINAVLQHAQRLCSEGHKDADKIRKKADSILERRDANRKQASEQMARLADQLA
LHQFLQDCDQLTEWIQEKMIVAQDETYRSAKTVHSKWTRHQAFEAEVQANKERLERAQQA
GRALVAEKPEMAPLVEPKLQELEQQFNNLEDTTQAKGQRLFDDNRHVLYEQTCDDIDSWI
DELESQVLVSETGQDLASVTTILQKQRDVENQMALKARQVDALQGQAHYLEKLDPNRAEE
LITRRAVVEQRFERLQAPLEQRRRELLKKKEAYQFRRDVEDEKLWVAEKMPLVKSPDRGA
SLFGVQMLRKKEQSLRHEVDHHEPRVVAICEDGRRLAAEGHQDGPEFERLARELEELWAE
LRRALDARRDDLMISEKAHQYYFDASEAEAWMSEQELYMMVEERGRDEASAQKLRKKHQN
LEAAVDDYAETVRQLGDTARRLVQEGHPDSDQITVRQSQVDKLYAGLRDLALERRQKLEE
ALRLFGLSREVDDLMQWIAEREVVASSQELGQDYEHVTLLRERFNAFRDETRTVGEDRVQ
KASAQAEALMTGPDAAQAAQWKDALQEAWADLLELMDTRAQVLAASWDLHRFFHDCRDVY
QRILEKQNGMSEELGRDAVSVSNLQRKQANFENDLQTLGSAVEGIRSQASQLGAAYAGDK
AREIQTREAEVVAAWQRLLSSCDSRRARLADTGDLFRFLCMVRDLLLWMEEVVRQMNSSE
KPRDVSGVELLMNNHQSLKAEVDAREDNLAACLALGRDLLARNHYASGEIKEKLLALSTQ
RAALGARWDERWEHLQLILEVYQFARDAAVAEHWLLAQEPYLLSMELGHTIDEVEQLLKR
HEAFEKSAAAQEERFAALERLTTLELKELQGMDQDVQERRRALRRLDDHLRSSGIYEPFE
LKQMRAREEEQERRRQQEEMERLAALQPPPSHEPSSQDRVDAEASAEAAREPAILNGAES
AATAVAVSAAAPGAGTEGSPHATAASAASAAAAAATPASPSGPAASSSAPSTPPKIKRSR
SKSPFGSWRKKKLPVEEETERPAEDEIEGLLMRKHEWESTTKKASNRSWEKLYLVIRGTT
LAAYKDQKHYRQEPESHYRGEAPVDLRTATAERATDYTKKKHVFRLKLSNGGEFLFQAKD
EEELSQWLQQLQAAIGEATAGPSRAQTLPAERRDEPRKRSFFTLKKN
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggacatctccgtggggctccgttgggaccccagcacgaccaacgcccaggag
atggacgattacgactacgacggcggcaacagctcatcgcgactcttcgaacggtcgcgc
atcaaggccttggcagaggagcgtgaaatggtgcaacgcaaaaccttctgcaagtgggtc
aactcgcacttagttcgagccaactgtcgcatcaccgacttgaccacggatatgcgcgac
ggaaagatgctcatcaagctgctcgagattctctctggagagaaactgcaaaaaccaacg
aaaggcaagatgaagatccactgcttggagaacgtggacaaggcgctgactttcctcaag
gaacagcgcgtccaccttgagaacctgggatcgcacgacattgtcgacggcaactcgcgg
ctcaccctgggtctcatctggaccatcatcttgcgtttccagatccaagacatcacaatc
gagcaggtcgataaccaggagaccaagtctgcaaaggacgccctgcttctctggtgccag
atgaagactgctggctaccccaacgttaatgtgcgaaatttcacgacaagctggcgtgat
ggcctggccttcaacgctcttattcacaagcacaggcccgacctgattcagtacgacaaa
ctgtcacgctccaacgccatctacaacctcaacaatgcgttcacaactgcggagcagaag
ctggggctcacccggttgcttgacccagaggacgtattcgtggacaacccagacgagaag
tccatcatcacctacgtggtcacatactaccactacttctccaagatgaaggccgagact
gtgcagggcaagcgtatcggcaaggtcatcggccacgccatggagaacgagcgcatgatc
gccgagtacgagggcctcacctcggacctgctccgctggatcgaggagaccatcgtggcc
ctgtcggatcggcattttgccaactcgcttgtcggcgtgcagcagcagctgctggcgttc
aacgcctaccgcaccaccgagaagcccgtcaaatttgaggagaagggcaacctggaggtg
ctactctttgccctgcaaagcaggttgagggcaaataaccagcgcccgtatacgccgcgc
gagggtcgcctcctggccgacacgaaccgggcctgggagcgtctggagaaggcggagcac
gagcgggagctggccctccgcgaggagctgatccggcaggagaagctggagcagctggcg
gcccgcttcgaccgcaaagctggcatgcgcgagacctggctggccgagaaccagcggctc
gtgtcacaggacaactttggccaagacctggcgtcggcgcaggcagcggccaaaaagcac
gaggccattgagacagacatcctggcctacgaggaacgtgtgcaagcagtactggctgtg
gcgcgagaactcgagaccgagggctaccacgacgtggatcgcatcaatgccaggaaggac
aatgtgctgcgcctgtggaactacttactggagctgcttcggggtcggcgggcacgtctc
gaggcgtgcctgcagctgcagcaaggcttgcaagagatgttgtacattgtggacgccatg
gaggagctcaaggcccggctggccgtctcggacttgggccagcacctcatgggcgtcgag
gacctcttgcagaagcactcgctgctcgaggccgacgtcaacgtgctcggcgagcgggtg
cgcgccgccgttgcccaggcacccgccgaccccttggtggccgaaagggtgaagcagctg
gaggaggcgtatgctgaactgctggccctggcaacggagcgcaggcgtcggctcgaggac
tcgcgccgcctgtggcagttctactgggacatggccgaggagcaggcctggatcgaggag
aaggatcgcatcctgtcgtcgcttgagctggggcacgacctcaccatggtgcacctgctc
atctccaagaacaaggcaatggaggacgagctagcagcccacgagcagcagctgcaggcc
gtcatacggtctggcgagtcgctggccgcagagggcactcccggttctgagcgggtggca
gagcggtctgccgaggtgctggccgcatgggaccggctgcggcagctgcaggcccagagg
gccgagcggctcgccaaggccctggacttccaccagttcttcgccgatgccgatgacgtt
gacacctggatgcttgatacgctgatgctcgtgtcgagcgacgacgtgggtcgcgacgag
gcgaacgttcagtcgctgctcaagaagcacaaggaggtgatggaggagctcaagagctac
gcccaggccatcgacgctctccatgcccaggcgggggcgctggcggaacgagaatcgccc
gctgtcctggagcggctggcctccatcgaccgccgatacaaggacctcttggacctggga
cgcctgcggaagcagcgtctgctggacgcactctcgttgcacacactgctcaacgaggct
gacggcgtgcaccagtggatcgaggaaaagaacaagatgctcgacagcatggtgctcacc
aaggacgctgaagacacggaggtgatgcggcaccgattcgagggctttgagcaggagatg
aacagcagcgcgtcccgcgtggctgtggtgaaccagctggcgaggcagctgctcagcgtc
gagcaccccaacgcggaggaagtgctggccaagcagaactcactcaaccagagctgggct
tccctgcgagacgcggccgagaagaagcgggataacatctcatcggcccacggggtgcag
acgttccatgttgagtgccgcgagaccatcacgtggattgaggagaagaccaagctgctg
cgagccactgaagacctgggcgatgacctgacgggcatcatgacgctgcagcgacgtctt
tccggcatggagcgcgacctagccgccatccaagccaagctggacgctctggacaaggaa
gctgaccgcatcaagcaggagcaccctgaggaggctgaggccatccaggagcgcattctg
cagatcaaggcagtttgggagcagctcacgcagttgctcaaggagcgcgatgccaagctg
gaagaagccggcgacttgcacagattcttgcgcgacctcgaccacttccaggcgtggctg
accncgacgcagacagagatcgcgtcggaagacgagccgactacgctgcaggaggcagag
cggctgctggagcagcaccgcctcatccgccaggaggtggacaactacacggacgactac
accaagatgatggagtacggcgagcgcatcacttcggacgccgccgacgaagacccgcag
ttcatgttcctgcgcgagcgtctgcgggccctgcgcgacggctgggccgagctgcgccag
atgtgggagaaccggcaggcgctgctctcgcagtccctcaacctgcagctgttccagcgt
gacgccaagcaggccgaggtgctgctcagtcgccaggaacaccaccttgccaaggacgaa
caacccgcaagcttagagcaagtggaggatctgatcaagcgtcacgaggccttccttacc
accatggaagctaacgacgagaagatcaatgcggttctccaacatgcccagcgcctgtgc
agcgagggtcacaaagatgctgacaagattcgcaagaaagcagactccatcctcgagagg
agagatgccaaccggaagcaagcaagcgagcagatggcacgtctcgccgaccagcttgct
ctgcaccagttcctccaggactgcgaccagctgactgaatggatccaggagaagatgatt
gtggcgcaagatgagacgtaccgcagcgccaaaacggtccactccaagtggacgcgtcac
caggccttcgaggccgaggtgcaggccaacaaggagcggctggagcgtgcccagcaggcc
gggcgtgccctcgtggccgagaagcccgagatggcaccactcgtcgagccaaagctccag
gagctggagcagcagttcaacaacctggaggacacgacacaggccaagggccagcggctg
ttcgacgacaaccggcacgtcctgtacgagcagacgtgcgacgacatcgactcatggatc
gatgagctcgagtcacaggtgctggtctctgagacgggccaggacctggcctcggtcact
acgatcctgcagaagcagcgggatgtcgagaaccagatggcgctaaaggcaaggcaggtg
gacgcccttcagggacaggcgcactacttggagaaactcgaccccaaccgggccgaggag
ctcatcactcggcgggctgtcgtggagcagcgttttgagcgcctccaggcaccgctcgag
cagaggcggcgtgagctactcaagaaaaaggaggcataccagttccggcgcgacgtggag
gacgaaaagctgtgggtggccgagaagatgccgctggtcaagtcgcccgaccgcggcgca
tcactgttcggggtgcagatgctgcgaaagaaggagcagtccctccggcacgaggtggac
caccacgagccacgggtggtggccatctgcgaggacggccgccgcctggcggctgaaggc
caccaagacggaccagagtttgagcgcctcgcccgggagctggaggagctgtgggccgag
ctgcggcgggccctggacgctcggcgcgacgaccttatgatctcggaaaaggcacaccaa
tactacttcgacgccagtgaggcagaggcctggatgagcgagcaggagctgtacatgatg
gtggaggaacgtggaagggacgaggcgtcggcccagaagcttcgcaagaagcaccagaac
cttgaggctgccgtagatgactacgctgagacggtgcggcaactgggtgacacagcacgg
cggttagttcaagagggtcatcctgacagcgaccagatcaccgtgcggcagtcacaagtg
gacaagctctatgccggcctccgcgacctggccctggagcggcggcagaagctcgaggaa
gctctgcgattgtttggcctgagccgcgaggtcgacgacctcatgcagtggatcgctgag
cgggaagtggtggccagctctcaggagcttggtcaggactatgagcatgtcacgctgttg
cgggagcgcttcaacgccttccgcgacgagacacgcaccgtcggagaggaccgcgtccag
aaggctagcgcccaggcagaggccctgatgacgggacccgacgcggcgcaggcggcccag
tggaaggacgctttgcaggaggcgtgggccgacctgctcgaactcatggacacccgtgcg
caggtgttggcagcctcgtgggacctccaccggttcttccacgactgccgggacgtctac
caacgaattttggaaaaacaaaatggcatgtcggaggagctgggccgggacgccgtcagc
gtgtcgaacctccagaggaagcaggcgaacttcgagaacgacctgcagaccctcggctct
gctgtggagggaattcggtcacaggcatcacagctgggtgccgcatatgcaggggacaag
gcgcgtgaaatccagacgcgcgaggcggaggtggtcgcagcgtggcagcggttgctgagc
tcgtgcgacagccggcgggcgcggctcgcggacacgggcgacctcttccgcttcctgtgc
atggtgcgggacctgctgctgtggatggaggaagtggtgcggcagatgaacagctcggag
aagccgcgcgacgtctcgggcgtcgagctcctcatgaacaaccaccagagcctgaaggcc
gaggtggacgcccgcgaggacaaccttgccgcctgcctcgccctggggcgggacctcctt
gcccggaaccactacgcatcgggcgagatcaaggagaagctgctggcgctgagcacgcag
cgggcagccctgggcgcccgctgggacgagcgctgggagcacttgcagctcatcctggaa
gtgtaccagtttgcgcgggacgccgcggtcgccgagcactggctgctcgcccaggagccc
tacctgctcagcatggagctgggacacaccattgacgaggtggagcagcttctcaagcgg
cacgaggctttcgagaagtcggctgccgctcaggaggagcgattcgcagcgcttgagcgc
ctcaccacgctcgaactcaaggagctgcaaggcatggaccaggatgtccaggagcggcgc
agagcactgcgtaggctagacgaccacctacgcagttcgggcatctatgagccgttcgaa
ctcaagcagatgcgagcgcgggaggaggagcaggagagacgccggcagcaggaagagatg
gagcgccttgcagccctacagcccccgccgagccacgagccgtcttcccaggacagggtc
gacgccgaagcttctgcggaagccgcccgagagcctgcaatcctgaacggcgccgaaagt
gcggcgacggcggtcgctgtgtcggctgcagcacccggagctggaacagaggggagcccc
cacgccacggccgcatcagccgcgtccgccgccgctgctgccgccacgcccgccagcccg
tcgggcccagccgcgtcatcgtccgcaccgagcactccgcccaagatcaagcgctctcgt
tccaagtcgcctttcggcagctggcgcaagaagaagctgcccgtagaggaagagacagag
cggccggctgaggacgagatcgagggtctgctgatgaggaagcacgagtgggagtccacg
accaagaaggcctccaaccgatcgtgggagaagctatacctcgtcatccggggaaccaca
ctggccgcgtacaaggaccagaaacactaccgacaggaacctgagagccattaccgcgga
gaagcaccggtggacctgaggacagcgaccgccgagcgtgctaccgactacaccaagaag
aagcacgtctttcggctcaagctttccaatggtggagagttcctcttccaagcaaaggat
gaggaggagttatcccagtggctgcaacagcttcaggcagccatcggcgaggccacggca
ggcccatcgcgagcacagacattgccggccgagcgcagggacgagccccgcaagcgcagc
ttcttcaccctcaaaaagaactaa
DBGET
integrated database retrieval system
