Rhipicephalus microplus (southern cattle tick): 119166880
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Entry
119166880 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119166880
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmp01002
]
119166880
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmp04121
]
119166880
03036 Chromosome and associated proteins [BR:
rmp03036
]
119166880
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119166880
Peptidases and inhibitors [BR:
rmp01002
]
Metallo peptidases
Family M67
119166880
Ubiquitin system [BR:
rmp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119166880
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
119166880
BRISC complex
119166880
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
119166880
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119166880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
KIF21A_4th
Motif
Other DBs
NCBI-GeneID:
119166880
NCBI-ProteinID:
XP_037274162
LinkDB
All DBs
Position
4:complement(48564984..48568336)
Genome browser
AA seq
300 aa
AA seq
DB search
MSTVRVNLSADVYMVCLSHALSTEKEEVMGLLIGEIDEMKVAHISAVILLRRSDKRKDRV
EISPEQLSDASTQAETLAINLRKPMRVLGWYHSHPHITVWPSHVDVQTQAIYQMMDEGFV
GLIFSVFSEDATSKLNQIQVTCFQSVNQASNGEPQRYVRMEIPLHIVPCTYISQACLDAL
VRLPEILCQEEQDMYNMTKQVPGLDLLTRMHNNSVFVKALCNIAESVSGPLLQSLENRLR
QNRDKIERMRAEKDELLQKIAVAEACASCSGCHQEHRQGCGPKPVMCAAYSVHTPGMNGR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtacgggttaatctgtccgcggatgtttacatggtctgcctgagccatgcg
ctttccacggagaaggaggaggtcatggggctcctcatcggagagatcgacgaaatgaag
gtggcccacatatctgcggtgatattgctgcggagatccgacaagaggaaagaccgcgtc
gaaatttcccccgagcaactctcggacgcttcaacacaggctgagacactcgcaataaac
ttgaggaaaccgatgagagttctaggctggtaccattctcacccgcacatcacagtgtgg
ccatcgcacgttgatgttcagacccaagccatataccaaatgatggacgaaggatttgtg
ggtctcatattctccgtgttcagcgaagatgctacatctaagttgaaccagattcaagtt
acgtgcttccagtctgtcaaccaggccagcaatggcgaaccacagaggtatgtgcgtatg
gagattcccctgcacatagtgccctgcacgtacatcagccaagcatgcctcgatgccctg
gttcggctgcccgagatcctctgccaggaggagcaggacatgtacaacatgactaaacag
gttccgggtttagaccttctcaccagaatgcacaacaactctgtcttcgtcaaggctctg
tgcaacattgcggaatctgtgagcggcccactgctccagagcctggagaatcggttgcgg
cagaaccgagacaagatcgagcgcatgcgtgccgagaaggacgaactcctgcagaagatt
gcggtggccgaggcgtgcgcgtcctgctcaggctgccatcaggagcaccgccaaggctgt
ggacccaaaccagtgatgtgcgccgcgtacagtgtacatacaccaggaatgaatggacgc
tga
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