Rhipicephalus microplus (southern cattle tick): 119166887
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Entry
119166887 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119166887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119166887
03021 Transcription machinery [BR:
rmp03021
]
119166887
Transcription factors [BR:
rmp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
119166887
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119166887
RNA polymerase III system
TFIIIB
119166887
RNA polymerase I system
SL1/TIF-1B
119166887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
SOG2
Motif
Other DBs
NCBI-GeneID:
119166887
NCBI-ProteinID:
XP_037274173
LinkDB
All DBs
Position
4:48673050..48690610
Genome browser
AA seq
308 aa
AA seq
DB search
MDMSSPVFSLNLGTPLSVSAQADNVEEQHLQQLARQIQPSPLQPQQHDSPMHQSPSTQQR
NASVIQPYAASSGLTPQSLMQPQTPAGHVHSSGATPTGAGSTPHSASAGLFPSTPGPPMT
PITPASADPGIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT
ALIFSSGKMVCTGAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRL
EGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYP
ILKGFRKQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcgagtccagtgttcagcttgaacctcggcacgccgctgtcagtgtccgcg
caagccgacaacgtcgaagagcagcacctgcagcagctcgcgcgccagatccaaccgtcg
ccgctgcaaccgcaacaacatgactcgcccatgcaccagtccccgtcgacgcagcagagg
aatgcgagcgtcatacaaccgtacgcggcgagctcgggactcacgccgcagtccctcatg
cagccccaaacgccggccggacacgttcactcgtctggtgcgacaccgactggtgcgggt
tcgacaccacactcggcaagtgcaggcctgttcccatcgacacctggccctcccatgaca
cccatcacaccagcatcagcagatcctggaattgttccacaactacagaacattgtctct
acggtaaacctgggctgtaagctggatctgaagaagattgccttgcatgccagaaatgcc
gagtacaatcccaaacgttttgccgccgtcatcatgcgcattcgggagcctcggaccacg
gccctcatcttcagttcggggaagatggtgtgcactggagccaagagtgaagagcagtca
aggttggccgccaggaagtatgctcgcatcatccagaagttgggttttgacgccaagttc
cttgatttcaaaattcagaacatggttggcagctgtgacgttcgttttcccatacgtctc
gaaggccttgtcctcacacacagccagttttcaagttacgagcccgagctcttcccggga
ctcatctaccgtatggtgaagcctcgtatcgtcttgctcatatttgtatctggaaaagtc
gtgctcacaggtgccaaagtgaggtctgaaatctacgaggcctttgacaacatctacccg
atactgaagggtttccgcaagcagtga
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integrated database retrieval system
