Rhipicephalus microplus (southern cattle tick): 119166901
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Entry
119166901 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: protein trachealess-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119166901
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119166901
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
DUF6958
Motif
Other DBs
NCBI-GeneID:
119166901
NCBI-ProteinID:
XP_037274189
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Position
4:complement(49558492..49918407)
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AA seq
865 aa
AA seq
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MQHPQHPHGLVDGYAAALPMDLHVPHHQGYHPYFRYLDSSMVMKAGGDDGTGAAVVQSRI
LEMRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSQ
HGHRPWLRDTQPSKALKGASLRGRSINNFAVDIFEQHQGTHILQSLDGFTFALGADGRFL
YISETVSIYLGLSQVEMTGSSVFDYVHHQDHAELAEQLGINLSQSVSSPSGGSGGSDDGS
STPNSLDRPAPVMTLSSSAAYKGLERSFCVRMKSTLTKRGCHFKSSGYGSVVLVLCHLRP
QYSFSPGRSKQPPQILGMVAMAIALPPPSVNEVRLECDMFVTRLGFDFRIAHCEPRVADL
LDYSPEDLAGRNLYALVHGQDVHKLRKCPRRTVMMNKGQVMSGYYRIMNKNGGFTWMQTC
ATVICNNKNSEEQSIICVNYVLSGVEYEHCVMDCSQMRGLGDIKPDDPSNSERGSTPENE
PRDERSPGRATEPSPKGHEAPPSSTPALGGSQDVPSEQQQHLTQLGTVGKLDSLRNAKDG
AEHASASPARYEAAAHRPAAPRLPARGARTRAAAVLAPSARDRAAARRACSRQARPGASR
RRTATDGPPSRRWWSSTTRSAVSSQGPASGNGDDSCDGPDGLSRPWKAGGGSGQVSTGEG
LTVRELEDAMKKHLPEVRSARSAAIQWIGAPHQSGTGASAHAAGGPLPASTLLRQLYVNR
ESVIRSGSHVSAASSRPTYYGDVPTPPEGPWTTPDAFVLPPYAGYVEPPPPFSAVTPPSS
VSPRDNKLGLTESPAFSEAAAVAAAAAMPHMRHYVSAAELPLKPQVLVHPGSLDYATPQE
QQLYAGGFHLYGKPNGAWYSQQPNT
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatccccagcacccgcacggtctcgtggacggatacgcggccgcgctgcccatg
gacctgcacgtgccgcatcaccagggataccatccctacttccggtacctggactcctcc
atggtcatgaaggctggcggtgacgatggaacaggagccgcggtcgtccaatcacgtatc
ctcgagatgcgcaaggaaaagagccgggacgcagccaggtcacggcggggcaaggagaac
tacgagttttacgagctggccaagatgctgccgctgccggcggccatcaccagccagctc
gacaaggcctccatcatccgcctcaccatttcctacctgaagctcagagacttttcccag
cacggacaccggccctggctcagggacacgcagccctcaaaggcactcaaaggagcttca
cttcggggacggtctataaacaacttcgccgtggacattttcgagcagcaccaaggcacg
cacattctacagtcactagacggttttacctttgcgctgggagcagatggccgctttttg
tacatttcggaaacagtgtccatctaccttgggctgtctcaggtggagatgacgggcagc
agcgtgttcgactacgttcaccaccaggaccatgccgagctggccgagcagctgggcatc
aacctgtcgcagtctgtgtcctcgccgtcgggtggctcgggtggctcggacgacggctcg
tcgacgccaaactcgctggacaggccagcccccgtgatgactctcagtagcagcgcagcc
tacaagggtctagaaaggtccttctgcgtacgcatgaagtctactcttacgaagcgaggc
tgccacttcaagtcgtccggatacgggtcagtggttctggtcctgtgccacctccggccc
cagtactccttctcgcccggccgctctaagcagcctccgcagattctgggcatggtggcg
atggcgatcgcgctgccgccgccctcggtcaacgaggtgcgcctcgagtgcgacatgttc
gtcacgcggctgggattcgacttccgcatcgctcactgcgagcctcgcgtcgccgacctg
ctcgactacagccccgaggacctggccggacgcaacctgtacgccctggtgcacggccag
gacgtgcacaagctgaggaagtgtccacgtcggaccgtgatgatgaacaagggccaagtg
atgagcggctactaccggatcatgaacaagaacggcggcttcacctggatgcagacctgt
gccacagtcatctgcaacaacaagaactcggaagagcagagcatcatctgcgtaaactac
gttctgagtggcgtggagtacgaacactgcgtgatggactgcagccagatgcgcggtttg
ggtgacatcaagcccgacgatccgagcaactccgagaggggatccacgccggaaaacgag
ccacgagatgagcggtcgcccggccgcgccaccgagccttcacccaagggccacgaggcg
ccgccatcgtcgacccccgctctgggagggagtcaggatgttccctctgagcagcagcag
cacctaacgcagctgggcactgtggggaagcttgactcgctcaggaatgccaaggatgga
gccgaacatgcgtcagctagtccagcgcgctacgaggcggcagcccaccggccagcagcg
ccaagacttcccgcaagaggagctcggacgagagcggcagccgtgctagccccaagtgct
cgcgaccgggcagccgcgcgtcgagcctgcagccgccaagcccggcccggagcctcccgc
cgccggacggctacggacgggcctccgagccgccgctggtggtcgtcgacgacccggtcc
gccgtctcctcccaaggtccggcgtcgggcaacggcgacgactcctgcgacggtcccgac
ggcctgtcgcggccttggaaggcggggggaggaagcggccaggtttccaccggcgaaggg
ctgaccgtgcgcgaactcgaggacgccatgaagaagcacctgcccgaggttcgatcggct
cgctcggcggccatccagtggatcggggcgccccaccagtccggtaccggggcgtcggca
cacgccgccggcgggcccctgcctgcgtcgacgctgctacggcagctgtacgtcaaccgc
gagtcggtgatacggtccgggtcgcacgtgtccgccgcctcctcgcggccgacgtactac
ggagacgtgccgacgccccccgagggaccgtggacgacgcccgacgcgtttgtcctgccc
ccgtacgccggctacgtcgagccgccacccccgttctcggccgtcacgccaccgtcgtcc
gtgtcgccgcgcgacaacaagctaggcctaaccgagagtccggccttctccgaagcggcg
gccgtggccgcggcggcggcgatgccgcacatgcgccactacgtgtctgcggccgagttg
cccctcaagccgcaggtgctcgtccatcccggaagcctggactacgcgacgccgcaggag
cagcagctctacgcgggcggttttcacctgtacggaaagcccaatggtgcctggtactcg
cagcagccgaacacgtag
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