Rhipicephalus microplus (southern cattle tick): 119166929
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Entry
119166929 CDS
T07403
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119166929
09122 Translation
03013 Nucleocytoplasmic transport
119166929
03015 mRNA surveillance pathway
119166929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119166929
03041 Spliceosome [BR:
rmp03041
]
119166929
03009 Ribosome biogenesis [BR:
rmp03009
]
119166929
03012 Translation factors [BR:
rmp03012
]
119166929
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119166929
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119166929
mRNA cycle factors
Stress granule specific factors
119166929
Spliceosome [BR:
rmp03041
]
Complex C
Other components
EJC/TREX
119166929
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
90S particles
Helicases
119166929
Translation factors [BR:
rmp03012
]
Eukaryotic type
Initiation factors
eIF-4
119166929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
119166929
NCBI-ProteinID:
XP_037274214
UniProt:
A0A6G5A143
LinkDB
All DBs
Position
4:complement(51485607..51524390)
Genome browser
AA seq
401 aa
AA seq
DB search
MAARRRVVQTEDLSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRSIK
PVIKGRDVIAQAQSGTGKTATFSIGVLQTVDTQMRETQALILSPTRELAVQIQKVILALG
DYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRNLRTRAIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMREANFTVSSMHGD
MPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgccgccgcgttgtgcaaacagaggacttgtcgaatgtggagttcgaaacc
agcgaggatgtagaggtgataccgacgttcgacgccattggcctcagagaagatctgctg
cgaggcatttatgcatatggttttgagaagccatctgccattcagcagcgttctatcaag
ccagtgatcaaaggcagggatgtgattgctcaggcccaatctggcactggcaagactgct
accttttccatcggagtgttgcagaccgtcgacacacagatgcgggagacgcaggctctg
atcttgtcgcctacacgcgagctggccgtacagatccagaaggtgattctggcattgggc
gactacatgaacgtccagtgccacgcctgcattgggggcaccaacttgggcgaagacatc
cgcaagcttgactatggacagcacgtagtttctggcactccaggacgtgtctttgacatg
atcaaaaggcgaaacctgcgcactcgtgctatcaagatgttggttctcgacgaagctgat
gaaatgctaaacaaaggtttcaaggagcagatctacgatgtgtaccggtacctgccccct
tgcactcaggtggtgctcatctctgctaccctcccccacgaaatcctggagatgacaagc
aagttcatgacagaacctgtgcgaattctggtcaaacgtgatgagttgaccctggaaggc
atcaagcagttctttgtggccgtggagcgtgaggagtggaagtttgacaccctgtgcgac
ttgtacgacacactcaccatcacccaggctgtcatattctgcaacaccaagaggaaggtg
gactggttgagcgagaagatgcgggaagctaatttcaccgtttcgtccatgcatggtgac
atgcctcagaaagagagggacgccattatgaaggagttccgctctggccagagtcgagtg
ctcatcaccacagatatttgggcacggggcatcgatgtccagcaggtgtcccttgtcatt
aactatgatctgcccaacaaccgagagttgtacatccacaggattggacggtccggtcgt
tttggtcgaaaaggtgttgccatcaattttgtcaaaaacgatgacatccgtatcttgaga
gacattgagcagtactacagtacccagattgatgaaatgcccatgaatgttgctgacctc
atctga
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