Rhipicephalus microplus (southern cattle tick): 119167014
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Entry
119167014 CDS
T07403
Name
(RefSeq) pinin-like isoform X1
KO
K13114
pinin
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119167014
03015 mRNA surveillance pathway
119167014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119167014
03041 Spliceosome [BR:
rmp03041
]
119167014
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119167014
Spliceosome [BR:
rmp03041
]
Complex C
Other components
EJC/TREX
119167014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
119167014
NCBI-ProteinID:
XP_037274317
LinkDB
All DBs
Position
4:complement(59232713..59245431)
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AA seq
465 aa
AA seq
DB search
MAASGVFSLLKAEFEAAQKSLKDVDETIKKLTGRNPEEFRNQARRQAGPAQKAATEQGGR
ERFTKKPAIATAGPPAKRRNLGGPPLRTPIEAPAEDSGDEEELPRKGGVQSSVVAAPAKD
SLRTRREVSALQKGDRKCMERNRRMFGMMLGTLQKFQSEETKRKDQVQSQKRAEIEQKLE
QAAEREKAELRKERQDLFLARRQKQQGIRRLELKMEVARLHEEAEARQRLLLNFIHTRTK
PHIMFKPARHTPETEKRLKESQKRILAIIESRRAKVKEELDAIDELYHRDNINAHAGEEE
EEEIYPDKENRGPSKDQSAEDEEQATANSGAEPSADADKQDRVEAKSEPRGNGEVAEGIA
TTKATDGDVAEPMDTAEPAEAAKGQSAAGDRSKPEAAKETTANRESAEGSTEPTEDEPTT
KAADASEESAKAEEEPLKEEAPVAPAEVPSINALGDEKFEPIYDE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctggcgtgttttccctgctcaaagccgagtttgaagcggcgcaaaagtct
ctcaaggatgtggacgaaaccatcaagaagctcacgggccgaaaccccgaggagttcagg
aaccaagcccgcagacaggcaggacctgctcagaaggctgccaccgaacaaggaggccgg
gaacggttcacgaagaagccggctatcgcaacagcaggtccccccgccaaacgaagaaac
cttggaggaccgccgctacggacaccaatcgaagctcccgcagaggacagcggcgacgag
gaagaactaccgagaaagggtggcgttcagtcctccgttgtggcggcgcccgcgaaggat
tcgttgcggacgcgccgagaagtgagcgccctgcaaaagggcgaccgcaagtgcatggag
cgcaaccggcgcatgttcggcatgatgctgggcaccctgcagaagttccagagcgaggag
accaaacgcaaggaccaggttcagtcccagaagcgtgctgaaattgaacagaagctggaa
caggcagccgagcgtgaaaaggcggagctgcgcaaggagcgtcaggacctgttcctggcg
cgacgccagaagcagcagggcattcgtcggctagagctcaagatggaggtggcccgcctg
cacgaggaagctgaggcccgccagcgactgctgctcaacttcatccacacgaggaccaag
ccgcacattatgttcaagccggccaggcacacacccgaaacggagaagcggctcaaggag
tcccaaaaacgcatcctcgccatcattgagagtcggcgcgccaaggtcaaggaagagctg
gacgcgatcgacgagctctaccaccgcgacaacatcaatgctcatgccggcgaagaggaa
gaggaggagatctaccccgacaaggagaaccggggaccctccaaggaccagtctgcagag
gacgaagagcaagccaccgcgaacagcggtgcagaaccttcggcagacgcagataagcaa
gaccgagtcgaagcgaagtccgagcccaggggcaacggcgaggtggcggaaggaatcgcc
acgacgaaggccaccgatggcgatgtggccgaaccgatggacactgcggaacctgcagaa
gccgcaaagggacagtctgctgcgggtgaccggagcaaaccagaggcagccaaggaaact
accgccaaccgggaatcggcagagggctcgactgagcctaccgaagacgaaccaaccacg
aaagccgccgatgcgtcggaagagtcggccaaagccgaagaagaaccgttaaaggaagag
gcaccagtagcccccgccgaggttcccagcatcaacgcgttaggagatgaaaagtttgaa
cccatctacgacgaatag
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