Rhipicephalus microplus (southern cattle tick): 119167040
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Entry
119167040 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119167040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119167040
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119167040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_33
AAA_22
TIP49
AAA_5
AAA_14
AAA_2
AAA_28
RNA_helicase
NACHT
Mg_chelatase
nSTAND3
AAA_17
Zeta_toxin
ABC_tran
TsaE
AAA_18
IstB_IS21
AAA_3
Viral_helicase1
NB-ARC
AAA_19
Parvo_NS1
Sigma54_activat
Rad17
Cytidylate_kin2
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
119167040
NCBI-ProteinID:
XP_037274346
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All DBs
Position
4:61754697..61757209
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AA seq
741 aa
AA seq
DB search
MSEPPQKRKRHSFGGDQRLLPRVRQVLSENDDLHAESIVARLQRRHPEYRRKKRKALLYS
VTNALEVIIQEDPQPGTDTVGQEDLDGSSVTDEDVVPYPDRNTMNKSISDLYKTPDSKLR
CPTTRVPRKHARTPKKPKSNDVDAAIQDNLKKRMAKEKEIALINPTARFADLGGMEGPLE
EVCNMLMHLKHPEVYKKLGVVPPRGFLLHGPPGSGKTLLAHAIAGELEXPMIRVAAPEIV
AGVSGESEERIRELFDRAVNSAPCIFFIDEIDAVTPKRETAQREMERRIVAQLLSSLDDL
SQRELPAEVLVIGATNRPDALDPALRRAGRFDREICLGIPDEAARERILAVLCRKLTLAP
EVELSVVAHKTPGYVGADLMALTREATMSAINRIFRGIEESVKATGEGPRNRLDVAVSLL
KEVPPLDDEQLKNLCVDVADFESALKLVQPSAKREGFATVPDVTWEDVGALSSIREALQV
AILAPVRHRDKYESLGLVTPTGILLHGPPGCGKTLLAKAIANESGINFISVKGPELLNMY
VGESERAVRQCFQRARNSAPCVIFFDELDALCPRRSDSADGGSASRVVNQLLTEMDGLEP
RKQVFVLAATNRPDIIDPAMLRPGRLDEVLYVGLPSPDERVEILKTLTRNGTRPLLEETV
SLESVGKDQRCEGFSGADLAALVRQASVIALTKYLKDGAEGTILVGSEHFDAAFGKVSAS
NKGRKTFKKVEKVKVASESVE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgccacagaagcgcaagcggcattctttcggcggagaccagaggcttttg
cctcgcgtccgacaagttctgagcgaaaacgacgacctgcatgccgagagcatcgtagcc
aggctacagcgacggcatcccgagtaccgacgcaagaagaggaaagctctgctgtactcc
gtgaccaatgcgctggaggtaatcattcaggaagacccgcaaccgggtacggacacggtg
gggcaagaagatctcgacggcagtagcgtcaccgacgaagacgtcgtgccgtatcccgat
cggaacacgatgaacaagtccatcagcgacctgtacaagacgcccgactccaagctgcgg
tgcccaacgacaagggttccgagaaagcacgcaaggactcccaagaagcccaagtctaac
gacgttgacgccgccatccaagacaacctcaagaagcgcatggccaaggagaaagagatc
gctcttattaaccctacggctcggttcgcggacctgggagggatggaaggacccctggaa
gaggtctgcaacatgctcatgcacctgaagcatcctgaggtgtacaagaagttgggggtc
gtgccgcctcgggggtttctgttgcacggacctcccggtagcgggaagaccctgctggct
cacgccatagcgggtgagttggaanctcccatgatccgcgtagcggcgcccgagatcgta
gctggcgtatccggagagtcggaggaacgcatacgcgagctgttcgacagggccgtcaac
agcgccccgtgcatcttcttcatcgacgagatagacgctgtgacgcccaagcgcgagacg
gcgcagcgcgagatggagcgacgcatcgtcgcccagctcctctccagtctcgacgacctg
tcgcaacgagagctgcccgcagaagtcctcgtcataggagccacgaacagacccgacgcc
ctggaccccgccctgaggagagccggacggttcgaccgcgagatatgcctcggcattccg
gacgaagcagcccgcgaaaggattctcgcagtactctgccggaagctgacgctcgcaccg
gaagtcgagctgagcgtagtcgcccacaagacgccaggctacgtcggcgccgacctgatg
gccctgactcgggaggccaccatgtctgcgataaacagaatctttcgcggtatcgaggag
agcgtcaaggcgaccggggaaggaccgcggaatcgcctcgacgtcgccgtctccctgctg
aaagaagtccctcctctggacgacgagcagctcaagaacctctgcgtggacgtcgcggac
ttcgagagcgcccttaagctggtccagccctcggccaagcgcgaagggttcgccaccgta
ccggacgttacgtgggaggacgtgggcgccctctcttcaatccgagaagcgcttcaggtc
gccatcttggctcccgtgcgacatcgggacaagtacgagtccctgggtcttgtcacgccg
acgggaatcttgctgcacggacctccgggttgcgggaagaccctgttagcaaaagccatc
gccaacgagtccggaatcaacttcatttccgtgaagggacccgagttgctcaacatgtac
gtgggcgagagcgagcgggccgtgcgacagtgtttccagagggcccgcaactcggctccg
tgcgtcatcttcttcgacgaactggacgccctgtgtcctcgacgttcggactcggcggac
ggtggctcagcgtcgcgagttgtgaaccaactcttgaccgagatggacggcctggaaccc
aggaagcaggtgttcgttttggccgcgaccaacaggccggacataatcgatccggccatg
ttacgaccgggtcgtctggacgaagtactgtacgtcggcctgcccagtcccgacgagcgc
gtggagatcctgaagacgttgacgagaaatggaacgagaccgcttctcgaggagacggtc
tctctcgaaagcgtcggcaaggaccagaggtgcgagggattctcaggcgccgacttggcg
gcgctcgtccgccaggcgtcggtgattgcgctgaccaagtacttgaaggacggagctgaa
ggcacgatcctggttggcagtgaacacttcgacgctgctttcggaaaggtgtcggcttcc
aacaaggggcgtaagactttcaaaaaggtggaaaaggttaaagtggcgtctgagagtgtt
gaatga
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