Rhipicephalus microplus (southern cattle tick): 119167073
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Entry
119167073 CDS
T07403
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03015
mRNA surveillance pathway
rmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119167073
09123 Folding, sorting and degradation
03018 RNA degradation
119167073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119167073
03041 Spliceosome [BR:
rmp03041
]
119167073
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119167073
mRNA cycle factors
Stress granule specific factors
119167073
Spliceosome [BR:
rmp03041
]
Complex C
Other components
Complex C specific factors
119167073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_10
RRM_7
RRM_5
RRM_occluded
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
119167073
NCBI-ProteinID:
XP_037274389
LinkDB
All DBs
Position
4:65124965..65134551
Genome browser
AA seq
684 aa
AA seq
DB search
MNPSGPNYPMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDPIKSKPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS
AFGNILSCRVATDEEASSKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPRKER
EKMLGDKARCFTNVYIKNFGDELDDEKLMVIFEKFGKITSAKVMTDESGKNRGFGFVSFE
DPESAERAVEELNGKEMGGRVLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVK
NLDDALDDERLRKEFAPFGNITSAKVMTDGNGRSKGFGFVCFSSPEEATKAVTEMNGRIV
VSKPLYVALAQRKEDRKAHLASQYMHRIAGMRMQMGQMFPPGGAGAAGYFVPTMPHQTAQ
RSYFPATLGPAQMRATPRWTGQQQQLRGPGGPQAGAGGPQGGQPQGGFPTSMPYQRQPRP
SLGTQPQRGALGSARPITGGQQAPPPQQAPPQQAPSAPRVMGPRPAGLAPQTAGGPRPTY
KYTQTVRNQPQVQQVSAPIAASFQVAAQQQQQQQVAAAAVAAQQVSQTQQAAVHIQGQEP
LTASMLAEATPHDQKQMLGERLFPLIHRMYPDLAGKITGMLLEIDNSELLHMLEHHESLK
AKVEEAVAVLHAHQAKENVAMKKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcggccccaactacccgatggcttctctctacgtcggcgacttgcacccg
gaggtcacggaggcgatgctttttgagaagttttccacggcgggtcccgtgctttcgatt
agggtttgcagagacatgatcactcgacgatcacttggctacgcatatgtcaacttccag
cagcccgccgatgcggagcgtgctctggacacaatgaacttcgaccctatcaaaagcaag
ccgatccgtatcatgtggtcacagcgagatccatcgctgcgaaagtccggggtcggaaat
gtcttcatcaagaacctcgacaagactattgacaacaaggccatgtacgacaccttctca
gcctttgggaacatcctgtcttgtcgcgtggccacagacgaagaggcatcctcaaaggga
tatggttttgtccatttcgagactgaagaagcagccaacaaggccatcagcaaagtgaat
ggcatgctgctgaacaacaagaaggtctatgtgggcaagttcatcccccgcaaggagcgc
gagaagatgcttggcgacaaggcccgatgcttcaccaacgtctacatcaagaactttggt
gacgagctcgacgacgagaagctcatggtcatctttgagaagtttggcaagatcactagc
gccaaggtgatgaccgatgagagcggcaaaaaccggggctttggattcgtctcgttcgag
gatcccgagagtgctgagcgcgccgtggaggagctcaacggtaaggagatgggtggccgg
gtgctgtacgtggggcgtgcccagaagaaggccgagcgccagtccgagctaaagcgccac
ttcgaacagctgaagcaagagcgcctgaaccgctaccagggcgtcaacttgtacgtcaaa
aatttggacgatgccctagatgacgagcggctccggaaagagtttgcacctttcggcaac
atcaccagtgccaaggtgatgaccgacggcaacgggcgttctaagggctttggatttgtc
tgcttcagctcaccggaagaggcgacgaaggctgtgactgaaatgaatggccgtatcgtg
gtctccaagccactttacgtcgctctggcccagcgcaaggaagaccgtaaggcacatctt
gcctcgcagtacatgcaccgcattgccggcatgcgtatgcagatgggacagatgttcccg
ccaggtggcgcaggtgctgcgggatactttgtgcccaccatgccccaccagacagcccag
cgcagctacttcccggccaccttgggaccagcccagatgcgtgccacccctcgctggaca
ggccagcagcagcagctgcgtggacccgggggaccccaggcgggggccggtggaccccag
gggggtcagcctcagggcggcttccctacctcgatgccctaccagcggcagcctcgccct
tcactggggacacagccgcagcggggagccctgggcagcgcacggccaatcactggtggg
cagcaggctccacctcctcagcaggcccctccccagcaggccccatcggcgcccagggtg
atgggcccccgtcctgcgggtcttgctccacagacggctggtggtccacgcccgacctac
aagtacactcagaccgtgcgcaaccaaccacaggtccagcaagtctctgcacccattgcc
gcttcattccaggtggccgcccagcagcagcagcaacagcaggtggccgcagctgcggtg
gctgcccagcaggtgtctcagacccagcaggctgcggtgcacatccagggccaggagccc
ctgaccgcctccatgctggctgaggccaccccgcacgaccagaagcagatgctgggcgag
cgcctgttcccgctgatccaccgcatgtacccagacctggccggcaagatcaccggcatg
ctgctcgagattgacaactctgagctgctgcacatgctcgagcaccacgagtcgctcaag
gccaaggtggaagaagccgttgcagtgctgcacgctcaccaggccaaggagaacgtggcc
atgaagaaggagtag
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integrated database retrieval system
