Rhipicephalus microplus (southern cattle tick): 119167077
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Entry
119167077 CDS
T07403
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04137
Mitophagy - animal
rmp04140
Autophagy - animal
rmp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119167077
04137 Mitophagy - animal
119167077
04148 Efferocytosis
119167077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119167077
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119167077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HIF-1
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
119167077
NCBI-ProteinID:
XP_037274392
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All DBs
Position
4:65909615..66199228
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AA seq
881 aa
AA seq
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MCAAKVASAPKERRKNSEKRKEKSRDAARCRRSKESEIFTELSQQLPLPESVACQLDKAS
VMRLAISYLRLREILEPIAEVAKSAACSIYDSSVLEALDAVLLVLSAEGEIVFLSDNVGR
HLGLNQVDLMGQSVYEYCHPCDHDELKAALLPKPEDLHDPSPQPCHFLMRLRCTLGSKGR
GVSVKSASSYKMMQCVGTRVSREVAPRHSPEEEQGSPLPAAMVTKEEEETPTTVPHLPIS
IIIRERRHFLVCVAQPIPHPSNIEVPLGTHTFLSRHNPSMCFTHVDDRTETFLGYTSEEL
LGKSVYSYFDPRDVLHLQQDFKTLFAKGQCETGQYRFLAKHGGCVWVLTQATLIYENSSC
SKPQCVVCVNYVLSGASEKHEVLAEQQLTSTAVKPKEPEPKLQPLPAAPVVEAAAAAAAA
AEEDESESEDEDDEEQCFCSSTSKIFAPRTADMNKGFLIFADDDSGLTVLREESEPEDLT
HLAPRAGDDTIPLEGLPSDVLGDAFSLSDIYGDENKLLPDYALLPPEEDCPLGRKDPFLS
YRDDSDPLSSPGSCGTPPSSDGEGRCSSCSDVPSIESPVDRFAGLELKPEGHTDLQDDDF
DMRAPYISMHGDDFPLLSPDSVMWGPQDSSPGSSSSRSSLCNSPTFFGTSSSPPRPTLGS
LGPNPKSSLAALLVAELPPPSSRSREWTKHRARTNHPRSSGVSGPHRQDMARSARLTHPH
QQLHQSMTRGHLTRGLSTASDGRPHAYVTTALEQKMGMPSPPDPPPKRGSTERALGAGQL
ASPKRMRIDLRGLQLQNKDSVLLNLLVNGEDACHGYLCQTLRYDKRCPPSSPRPAPLLLD
EPIPTLQDLSQLDAEVNAPIQQLLTGEDLLSALDQSVPALV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgccaaagtggcaagcgctcccaaggagcgacgcaaaaattcagaaaaacgt
aaagagaaatcacgagatgcagcccgatgtcggcgcagtaaagagtccgagatctttact
gagctgtcgcagcagctgccgcttccggagagcgtggcctgccaactggacaaggcatcg
gtcatgcgcctggccatcagctacctgcggctgcgggagatcctcgagccaatcgccgaa
gtggccaaatcggcagcctgcagtatttacgattcgtctgttctggaggccctggacgcc
gtcctgctggtgctgtctgcggagggagagattgtcttcctctctgacaatgtgggacgc
catcttggtctaaatcaggtggacttgatgggtcaaagcgtatacgagtactgtcacccc
tgcgaccatgatgaactcaaggctgcgctgctgcccaaacctgaagacctacatgaccca
tctcctcagccttgtcatttcctgatgcgcctacgctgcaccctgggcagcaagggacgt
ggcgtcagcgtcaagtcggcctcttcttacaagatgatgcagtgtgtgggcacacgcgtc
tcacgcgaggtggcccccaggcattctcccgaagaagagcaggggtcgccgctacccgcg
gcgatggtgaccaaggaagaagaggagaccccgacgaccgtgccccaccttccaatcagc
atcatcatccgcgagcggaggcacttcctggtgtgcgtggcccagcccatcccgcacccg
tctaacatcgaggtgcccctggggacgcacactttcctcagtcggcacaaccccagcatg
tgcttcacgcacgtcgatgacagaacggagaccttcctaggctacacatctgaagaactg
ctcgggaagtctgtctactcctacttcgacccgagggacgtgctgcatttgcaacaggac
ttcaaaacattgttcgccaagggccagtgcgagaccggccagtaccgcttcctggccaag
catggtggctgcgtgtgggtgctgacccaggcgaccctcatctacgagaacagcagctgc
agcaagccacaatgcgtcgtctgcgtcaattacgtgctgagtggtgccagcgagaagcat
gaagtgctcgcggagcagcaactgacttcaacagcagtgaagccgaaggagccggagccg
aagttgcagccactgccggctgcccctgtggttgaagcagcagcggcagcagcagcagca
gcagaggaggacgagtctgaatccgaagacgaggacgacgaggagcagtgcttctgcagt
agcacgagcaaaatctttgctcctcgcacggcggacatgaacaagggcttcctcatcttc
gctgacgatgacagcggcctcacagtgctgagagaggaatcggaacctgaggacttgacc
cacttggcaccgcgggctggcgacgacaccattccattggagggtctgccttctgatgtg
cttggtgatgcattctctctgtcggacatctatggcgacgaaaacaagttgttgccagac
tatgcactgcttcctcccgaggaggactgcccgctgggtcggaaagaccccttcctcagt
taccgggatgacagtgacccgctgtcgtcgccaggatcatgtggcacaccgccgtcctca
gacggagaagggcgttgcagcagttgctcggacgttcccagcatcgagagccccgtggac
aggtttgccggcctcgagctgaagcccgaagggcacacagatctccaggacgatgacttt
gacatgcgagcaccgtacatctccatgcacggagatgacttccccctgctcagtcccgac
tcggtcatgtgggggccccaggactcttctcccggaagctcgtccagtcggagctctctc
tgcaacagcccgacattttttggcacctcttcgtctcctccgaggccaacgttggggtct
ctgggtcccaacccaaaatccagtctggctgccctcctggtggctgaattgccgccacct
tcttcaaggtcacgagagtggaccaagcaccgagcacgaacgaatcaccccaggtcatcg
ggagtctccgggccacatcggcaagacatggcgaggtcagcgcggttgacgcatccgcac
cagcaactgcaccagtcgatgacgagaggccacctgacacggggtctgtcgacggcgagc
gacggtcggccacatgcgtacgtgacgacggcgttggagcagaagatgggaatgccatcc
ccgccggacccaccgccaaagcgtggctccacggaacgggccctgggggctgggcagctg
gccagccccaagaggatgcggatagacctgcgaggcttgcagctccagaacaaagacagc
gtgctgctgaacttgctggtgaacggagaagacgcctgccatggatacctgtgccaaacc
ttgcgctatgacaagaggtgcccgccgtcgtctccacgtcccgctcctctcctgctagac
gagcctattccaacattgcaggacctgagtcagctggatgccgaggtcaatgcgccaatc
cagcaactgctcactggcgaggacttgctcagtgccctcgaccagtcagtgcctgcgctt
gtctga
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