Rhipicephalus microplus (southern cattle tick): 119167785
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Entry
119167785 CDS
T07403
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119167785
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119167785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDCD10_N
Motif
Other DBs
NCBI-GeneID:
119167785
NCBI-ProteinID:
XP_037275208
LinkDB
All DBs
Position
4:complement(5923210..6543316)
Genome browser
AA seq
1364 aa
AA seq
DB search
MTSRLDRLFLLLDTGSSPVTRRAAAVQLGEVQKLHPHELHNLLAKVRRYLHSSSWDTRIA
ASQAVEAIISHVPQWDPPGLSKVEQDNELAKRGAANARAASHWMRFENFDLHQVLKHGGD
LLASEGTEFDLEDGLLGGSQSKEVLLQQRRLLNRRLGLEMAERIGLDTSNLFSAEDLSLN
CSSGKAELQTMPRGTAPQSHAKLECNTTSGGHWECGTAVGHVSTPLLPCPSTGMFRGLKR
RVSKDGSSLSKKLCTAGPNAVSIKEDAPFDAVVEENLWEHEQCSDEWPLEAFVEALCQDL
FSAAWEVRHGAATALREVIRLHGRGGGRSSSTPAGQMEAANQLFLEDLSLRLLCVLALDK
FGDFISDQVVAPVRETCAQTLGHVLNFMTSDKLNSDVDGAEHSSALGEGICGVLRVLLQL
LQRPEWEARHGGLLGIKYLLAVRKDLTSVLIPVVFEPVFQGLQDQNDDVSAVAAAALVPV
TEDLVKILPQQVPRVVRTLWDALLELDDLTSSTSSILMLLAALLSHSTSVHPIQGSDGCL
RDKKQGVVQHPGNLMCADSGSSDASAPLAQWVPRLWPFLGHNAIAVRLSVLRSLLILCSD
KGAPLPLSEWVPPLLPCLLRLLYQRCLLETAPEVLDLIYQVWENLVHGAPLGSLLTATCP
YLSSWLCLLMHPAHLQVDVGALQWLVLPPNLKPDKRMRRLGSIGGIGPSHCSTEGGPCVI
PVLGGGEVYLAGAESLNESPAERERLVLQCRYMAAKLLGLLSGFVTRPMPGLEVPPVESP
VESFARLVLFHLASKSALQRMMTAAVMAHWVSLHPDHLCPSSVRERVLECLGETLYFDEM
ASSFTRLQQDARDFIALLRHFQIPLGSEFPANVVLTVDQVMELVTTVFQGLVQDVRVKPK
VLESLEEKRRCLLRTAQQMQKDQLLLTTRVQSLLSMFLVRLDQLPEKLNPVIRPLMESIR
REESVLLQEESADSLVHLMSSCVTRNPCPNGKIMRNLLMYLCSDSNVATPAMAQGNSPTG
AILTLFNMQKSAERAPVRRSGSVSGGRKGSLQASQSVESVDDYNGADDENVQRQNEVQRK
GAAQVLLVATKHFGASLPNQLPSLWEATMDPLLQRANMVFSGGGTHNGEPVAEEQELTTS
LQALEVIGPHLHSGLYSKLEATLPPLCAALDHNSPVVRHLVSRCFGMMARIRTEPTMAVI
VDKVLAKLGASDDDIQRRGAIEAIACVIEGLSLGVVPYLVFLVVPVLGRMSDQDEAVRLM
ATHCFAALVRLMPLDSGVIDKAGEPLSADLCERRASERHFLEQLMDARHADNYELCVPIN
AQLRSYQQARHLLNTSLLVHRDGFLHKVIRSICSLNEPTFLQKS
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaggctggaccgtttgttcctccttttggacactggctcctcacctgtgacg
cggcgagcagcggctgtccagctgggcgaggtgcagaagctgcatccacatgaactgcac
aacctcctggccaaggtgcgaagatacctgcacagctcatcatgggacacacgcatcgca
gccagccaagctgtggaggccatcatatcccatgtgcctcagtgggatcccccaggattg
tccaaggtggaacaagacaatgagctggccaagcgaggagcagcaaatgcaagggctgca
tcgcactggatgcgctttgagaatttcgacctccaccaagtgttgaaacacggtggtgac
ctccttgcatccgagggtaccgagtttgatctcgaggatggactactaggtggctcacag
tccaaggaggtgctactgcagcagcggcggctgcttaatcgacgtttgggcctcgagatg
gctgaacgcattggcttggacacctccaatctcttctctgccgaggatctcagcctgaac
tgtagcagtggtaaggcagagctgcagacgatgccacgtgggactgcgccccaatcacat
gccaagctggagtgcaacactacatcaggaggtcattgggaatgtggcacagctgttggc
catgtgtctacacccttactgccttgtccttcgacgggcatgttccgtggccttaagcgg
cgtgtaagcaaggatgggtctagcctgtccaagaagctctgcacagctgggcccaatgct
gttagcatcaaggaagacgcaccatttgatgctgtggtagaggaaaacctctgggagcat
gagcagtgttcggatgaatggcccctggaggcttttgtggaggctctctgccaggacctg
ttcagtgctgcctgggaagtgaggcacggtgcagccacagcccttcgtgaggtcatccgg
ctgcatggccgaggaggtggacgctcctccagcacacctgcgggacagatggaagcagcc
aaccagctgtttctggaagacttgtctctgcggctgctgtgtgtgcttgcactggacaag
tttggcgacttcatttctgaccaggtagtggctcctgtgcgtgagacctgtgcccaaacc
ctgggccatgttctcaacttcatgacgagtgacaagctgaattctgacgtagatggtgca
gaacattcttctgctttaggggaaggcatctgtggtgtgttgcgggtgcttctgcagttg
ctgcagcggcccgaatgggaggctcgtcacgggggcctactgggcatcaaatacctgctg
gccgtacgcaaggatctgacatctgttctgatcccagtcgtgtttgagccagtgtttcag
gggcttcaagaccaaaatgatgacgtgagtgctgtggcagccgcggcattagtgccagtc
actgaagacttggtcaagattctgccccaacaggttccccgagtggtgcgaacgctgtgg
gatgcactgctcgagctggacgacctgacctcctcgacgagcagcattctcatgcttttg
gctgcacttctgtcacactccacttcagttcatcccattcaagggtctgatggctgcttg
cgtgacaagaagcagggggtggtgcaacatcctggtaacttgatgtgtgcagacagtggc
agcagtgatgccagcgcacccttagcccaatgggtgcctcgactgtggccctttctgggc
cataatgcgattgccgtgcgactgtccgtgctgcgttcgctcctcattctttgctcagac
aagggagcaccactgccacttagcgaatgggttccacctctgttgccttgtttgctgcgc
ctgctataccagcgttgcctgctggagactgcaccagaagtgcttgacctcatctaccag
gtatgggaaaacttggtgcatggagcccccctgggttccctgctcactgcgacctgccct
tacctcagttcctggctgtgcttgctcatgcacccggcccacttgcaggttgatgttggg
gcactgcagtggttggttcttccaccaaatctcaagccggacaagaggatgcgacgcctc
ggcagtattgggggtattgggccatcacactgttcgactgagggcggcccctgtgtgatc
ccagtgctaggcgggggggaagtgtacctggcaggtgcagaatcactgaatgagagccct
gcagaacgagagcgcctggtcctgcagtgccgctacatggcagccaagctgcttggcctg
ctgtctggctttgtgacacgccctatgcctggcctggaggtgccaccagtggagagtcca
gtggagagctttgctcgtcttgtgctctttcacctagcctccaaaagtgcccttcagcgc
atgatgaccgctgcagtcatggcacactgggtcagcctacacccggaccatctgtgccca
tcatcagtacgtgaacgagtgctggagtgtcttggggagacgctctatttcgatgaaatg
gccagcagcttcacccgcctgcagcaggatgcacgggatttcattgcactcttgcgacac
tttcagatacctcttggttcggaattcccggcaaatgtcgtgctgacagtggaccaggtc
atggagctagtcaccacggtgttccagggattggtgcaagatgttcgtgtcaagcctaag
gtgctggagagcctggaggaaaaacgcaggtgcctgctacgtactgctcagcagatgcag
aaggaccagctattattaaccaccagggtgcagtctctactgtcgatgttccttgttcgc
ctggaccagctcccggaaaagctcaacccagtcattcgtcctctcatggagtctatacgc
cgggaagagagtgtcctcctgcaggaggagtcagcagacagcctggtgcatctgatgagc
agctgtgtgactcgtaacccgtgcccaaatggcaaaattatgcgcaacctgcttatgtac
ctctgctcagactcaaacgtagcgacacctgccatggcacagggtaactcgccaacggga
gccattcttaccctgttcaacatgcaaaagtctgctgaaagggcaccggtgcggcgctct
gggtcggtgtcgggtggtcgcaagggatccctgcaggcttcacagtcggttgagagcgtc
gatgactacaatggtgctgatgatgagaatgtccagcgacagaacgaagtccagcgaaag
ggagctgctcaggttttgttggttgcaaccaagcattttggggcgtccctgcccaaccag
ctgcccagcctctgggaggctacaatggatccactactccagagggccaacatggttttt
tcaggtggtggtacacataatggggaaccggtggctgaagaacaggagctcacaacaagt
ctgcaagccttggaagtcattggaccacacctacactcggggctttactccaagcttgaa
gccacactgccaccactgtgtgctgccctggaccataattctccagtggtgcgtcacctg
gtatcccgttgctttggcatgatggcccgcattcgaacagagccaacaatggcagtcatc
gttgacaaagtcttggccaagctaggggcttcagatgatgacattcagcggcggggagct
atcgaagccattgcctgtgtcattgaagggctgtccctgggcgttgtgccgtacctggtg
ttcttggtggtgcctgttctgggccgcatgagcgatcaggatgaagctgtccggctcatg
gccacccactgctttgctgccttggttcgcctgatgcccctcgatagtggagtcattgac
aaagccggagaacccttgtcggcagacctgtgtgagcgccgagcaagtgagcgccatttc
ttggagcagctgatggatgcacggcacgccgacaactatgaactctgtgtacccatcaat
gcgcagctgcgctcctatcaacaggcaagacatttgttgaacacttcattattagtgcac
agagatggtttcttgcacaaagtgattcgctctatttgctcacttaatgaacccaccttt
cttcagaaaagctga
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