Rhipicephalus microplus (southern cattle tick): 119169566
Help
Entry
119169566 CDS
T07403
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04142
Lysosome
rmp04144
Endocytosis
rmp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119169566
04142 Lysosome
119169566
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119169566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119169566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmp04147
]
119169566
Membrane trafficking [BR:
rmp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119169566
Exosome [BR:
rmp04147
]
Exosomal proteins
Proteins found in most exosomes
119169566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
119169566
NCBI-ProteinID:
XP_037276506
LinkDB
All DBs
Position
1:complement(67442535..67519172)
Genome browser
AA seq
1670 aa
AA seq
DB search
MTQILPIRFQEHLQLTNIGINAANVGFNTLTMESDKFICVREKVGDAAQVVIVDMANPTN
PIRRPISADSAIMNPASRVIALKASRTLQIFNIEMKSKVKAHTMTEDVVFWKWINVNTIA
LVTEGAVYHWSMEGDSQPQKMFDRHSSLSGCQIINYRTDAKIQWLLLIGISAQQNRVAGA
MQLYSMERKVSQPIEGHAAAFAQFKQEGNTEPSTLFCFAVRTPHGGKLHIIEVGQPAPGN
QAYPKKAVDVFFPPEAQNDFPVAMQMSPKHDVVFLITKYGYVHLYDLETGTCIYMNRISA
DTIFVTAPHEATSGIIGVNRKGQVLSVSVEEENIIPYITNVLQNPDLALRMAVRNNLSGA
EDLFVVRFNTLFSSGQYSEAAKVAANAPRGVLRTPQTIQRFQQVPNQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKDDKLECSEELGDLVKQVDPTLALSVYL
RANVPAKVIQCFAETGQFQKIVLYAKKVGYTPDYVLLLRQVMRLSPDQGTAFAQMLVQDE
EPLADINQIVDVFMESNLVQQCTAFLLDALKNNRPSESHLQTRLLEMNLMTAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAIVHTHLLNAEWLVNYFGSLSV
EDSLECLRAMLTHNLRQNLQICVQVATKYHEQLTTTALIDLFESFKSYEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYNAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCAEEVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEGRLHEGCQEPATHNALAKIYIDSNNNPERFLRENPYY
ESTVVGRYCEKRDPHLACIAYERGQCDRELVQVCNENSLFKSEARYLVRRRDPDLWAEVL
AESNPYRRPLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLENSVFSD
HRNLQNLLILTAIKADRSRVMEYINRLDNYDAPDIANIAIGSELYEEAFAIFRKFDVNTS
AIQVLIEHIQNLDRAYEFAERCNEPGVWSQLARAQLSQGMVKEAIDSFIKAGDHTAYLDV
VQTAHKTGSWEDLVRYLQMARKKGRESYVESELIYAYAKTNRLADLEEFVSGPNHADVQR
IGDRCFEDGLYEPAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFAC
VDSEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELISLLEAALGLERAHMGMFTEL
AILYSKYKPGKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAVVTMMQ
HPTEAWREAHFKEIITKVANIELYYRAVQFYLDHKPMLLNDLLLVLAPRMDHTRAVGHFS
RVGHLPLVKPYLRSVQSLNNKAVNEALNGLLIEEEDFQGLRTSIDAFDNFDNIALAQRLE
RHDLVEFRRLAAYLYKGNNRWKQSVELCKKDRLFRDAMEYAAESKNAETAEELLSWFLDE
KNYECFGACLFQCYDLLHPDVILELAWKHNIMDFAMPYFVQVMREYITKVDKLEENENQR
LEESAQNEQKPLVYAPEPQLMLTAPPGMLGAPGYAPPYGAPMPGYQGYSM
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagatactaccgatacgcttccaagagcatttacagctcaccaacatagggatc
aatgcagccaacgtgggtttcaacacgctcaccatggagtcggacaagttcatctgcgtc
cgagaaaaagtcggggacgctgcgcaggtggtcattgtagacatggccaacccgaccaac
cccatccggcggcccatctctgccgactctgccattatgaaccctgcctcgagagtcatc
gccctcaaggcgtcgcgcaccctgcagatcttcaacattgagatgaagagcaaagtcaag
gcgcacaccatgacggaagatgtggtcttctggaaatggatcaacgtcaacaccattgcc
ctggtcacggagggggccgtctaccactggagcatggagggagactcccagccgcaaaag
atgttcgaccgccactccagcctcagcggctgccagatcatcaactaccggacggatgcc
aagatccagtggctgctcctcatcggcatctcggcccagcagaaccgtgtggccggggcc
atgcagctctactcgatggagcgcaaagtgagccagcccattgagggccacgctgccgcc
tttgcccagttcaagcaggagggcaacactgagccctctaccctcttctgctttgccgtg
cggacgccgcatggtggcaagctgcacataatcgaggtgggccagcccgcgcccggcaac
caggcctatccgaagaaggcagtggacgtgttcttcccgcccgaggcgcagaacgacttt
ccggtggccatgcagatgagccccaagcacgacgtggtgttcctcatcacaaagtatggc
tacgtgcacctgtacgacttggagactggcacctgtatctacatgaaccgcatctcggca
gacactatttttgttaccgcgccccacgaggccacatcgggcatcattggagttaaccgt
aagggacaggtcctgtcagtaagcgtggaagaagagaacatcatcccatacatcacaaat
gtcctccagaacccagacctggcactgcgcatggcagtgcgcaacaacctgtcgggtgcg
gaggacctctttgtggtgcgcttcaacacactgttcagcagcggccagtactcggaggcg
gctaaggtggcggccaacgccccccgcggggtgctgcgcacgccacagaccatccagcgt
ttccagcaagtgcccaaccagccgggccagacttcgccgctgctgcagtactttggcata
ctgctggaccagggccagctgaacaagtacgagtccctggagttatgtcggcctgtgctg
cagcagggccgcaagcagctgctcgagaagtggctcaaggacgataagctcgagtgcagc
gaagagctcggtgacctcgtgaagcaggtggacccaacgctggcactgtccgtctacctg
cgtgccaacgtgccagccaaggtgatccagtgctttgccgagacgggccagttccagaag
attgtgctgtatgccaagaaggtgggctacacgcccgactatgtgctgctgctgcgccaa
gtaatgcggctcagccccgaccagggcacggcctttgcccagatgctggtgcaggacgag
gagcctctggccgacatcaaccagattgtggacgtgttcatggagtccaacttagtccag
cagtgcaccgcattcctgctggatgccctgaagaacaaccgaccctcggagagccacctc
cagacaagactgctggagatgaacttgatgacagcgccgcaggtggccgatgccatcctg
ggcaaccagatgttcacccactatgaccgcgcccacgtggcacagctctgcgaaaaggcg
ggcctcctccaacgggccctggaacactacaccgacctgtacgacatcaagcgggccatt
gtccacactcatttgctgaatgcagagtggctggtgaactactttggctcgttgtcggtg
gaggactccttggagtgcctgcgagcaatgctgacgcacaacctgcggcagaacctgcag
atttgcgtgcaggtggccaccaagtatcacgagcagctgacgaccaccgcgctcattgac
ctgtttgagtcgttcaagagctatgagggcctgttctacttcctcggctctatcgtgaac
ttcagccaggacccggaggtgcacttcaagtacatccaggccgcctgcaagacaggccag
atcaaggaggtggaacgcatctgccgagagagcaactgctacaatgctgagcgagtcaag
aacttcctaaaggaagccaagctgactgaccagctgccactgatcatcgtgtgcgaccgc
ttcgactttgtccacgacctggtactctacctgtaccgaaactccctgcagaagtacatc
gagatctacgtccaaaaggtgaacccttcgcgcctgcccgtggtggtgggtggtctgctg
gacgtggactgtgcggaggaggtgatcaagaacctgatcctggtggttcgcggccagttc
tcaaccgacgagctggtggccgaggtggagaagcgcaaccggcttaagctactgctgccc
tggctcgaggggcggctgcacgagggctgccaggagccggccacccacaatgcgctggcc
aagatctacatagactccaacaacaacccagagcggttcctgcgtgagaatccttactac
gagagcaccgttgtgggccggtactgcgagaagcgcgacccccatctggcctgcattgcc
tacgagcggggacagtgtgaccgagagctggtccaggtgtgcaatgagaactcgctgttc
aaaagcgaggctcgctacctggtccgacggcgagatccggacctgtgggcagaggttctg
gcggagagcaatccgtaccggcgccccctcatcgaccaggtggtccagacggccctctcg
gagacacaggaccccgaggacatctccgtgacagtcaaggcattcatgactgctgacctg
cctaatgagctgattgagctgctcgagaagattgtgttggagaactcggttttctcggac
caccgcaacctgcagaacctgctcattttgactgccatcaaggcggaccgctcgcgggtc
atggagtacatcaaccgactggacaactacgatgcccctgacatcgccaacattgccatt
ggcagtgaactctacgaggaggccttcgccatctttcgcaagtttgacgtcaacacttca
gctattcaggtgctgatcgagcacattcagaacctcgaccgggcgtacgagtttgctgag
cgatgcaacgagcccggagtgtggagccagctggcccgtgcccagctgagccaaggcatg
gtcaaggaggccatcgactcgttcatcaaggcgggtgaccacaccgcctatctggatgtg
gtgcaaactgctcacaagacgggatcgtgggaggacctggtgcggtacctgcagatggcg
cgcaagaaggggcgggagtcgtatgtggagtcagagttgatctacgcgtacgctaagacc
aatcgtctggccgacctggaggagtttgtgtcgggccccaaccacgcagacgtgcagcgc
atcggtgaccgttgcttcgaggacggcctgtacgagccggccaagctcctctacaacaat
gtgtccaactttgcccgcctggccatcaccttggtgcacctgaaggagttccagggtgcc
gtggactcggcgcgcaaggccaactcgacgcgcacctggaaggaggtgtgctttgcatgc
gtggacagtgaggagtttaggctggctcagatgtgtggcctgcacattgtggtgcacgcc
gacgagctcgaggacctcatcaactactaccaggaccggggctactttgaggagctcatc
tccctgctggaggcggccctggggctggagcgtgcccacatgggtatgttcaccgagctg
gccatcctctactccaagtacaagcccggcaagatgcgcgagcacctcgagctattctgg
tcgcgcgtcaacattcccaaggtgctgcgggccgccgagcaggcacacctgtgggctgaa
ctggtcttcctctatgacaagtacgaggagttcgacaacgctgtggtcaccatgatgcag
cacccgacggaagcctggcgagaggcacacttcaaggaaatcatcaccaaggttgcgaac
atcgaactctactatcgggctgtgcaattctacctggaccacaagccaatgttgctaaac
gacctgctgttggtactggcgccccgcatggatcacacgcgggccgtgggccacttcagt
cgagtggggcacttgcccctggtcaagccgtacctgcgctcggtgcagagcctcaacaac
aaggcggtcaacgaggctctcaatggcctgctgatcgaggaggaggacttccagggtctg
cgcacctccatcgatgccttcgacaacttcgacaacattgccctggcacagcggctggag
cggcatgacctggttgagttcagacgcctggccgcctatctgtacaagggcaataaccgc
tggaagcagtcggtggaattgtgcaagaaggatcgcctgttccgggacgcgatggagtat
gctgcagagtccaagaatgccgagacggcagaggagctgctgagttggttcttggacgag
aagaactacgagtgctttggtgcctgtctgttccagtgctacgacctgctgcaccccgac
gtcatcctcgagcttgcatggaagcacaacattatggactttgccatgccctactttgtg
caagttatgcgggaatacatcaccaaggttgacaagctagaagagaatgagaaccagagg
ctggaagaatctgcacagaatgaacagaaacccctcgtctatgccccggagccccagcta
atgctgacagcaccaccgggcatgttgggtgcacctggctacgcacctccttacggagca
cccatgccaggctaccaaggctacagcatgtag
DBGET
integrated database retrieval system
