Rhipicephalus microplus (southern cattle tick): 119170089
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Entry
119170089 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03440
Homologous recombination
rmp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119170089
03460 Fanconi anemia pathway
119170089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmp04121
]
119170089
03036 Chromosome and associated proteins [BR:
rmp03036
]
119170089
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119170089
Ubiquitin system [BR:
rmp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119170089
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119170089
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119170089
FA (Fanconi anemia) pathway
Downstream FA components
119170089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
MTBP_mid
Motif
Other DBs
NCBI-GeneID:
119170089
NCBI-ProteinID:
XP_037277025
LinkDB
All DBs
Position
5:17606122..17633184
Genome browser
AA seq
2162 aa
AA seq
DB search
MSHDDVRNQPRFRMYDDDDGHKSLFEAFVSHTAKDLGPIDENWFFKERASQISKCSQFGS
SSSVSSNPCTPVTSSCLSRNENETPASSTNTPASICQRNASFLEWTPLSPSPVVPSAFKT
PRVPKSFPQTLAITKNTPSPLWSPSLETPPLRTARSKQDLKVFAPRNLFHPPRKSRQSLS
SENEDNLEDENSKTFYLTEKRTLTRYCGSKKDVPLRKLEMQSNDLGAEDSFQKHVEGCCE
IPQVDSTHRGQNYVKVTPKRRGSPDASRSRDVGARIEKRANFVNPYDRTARIKHHLKENG
TPHIHVPDMTVIPNQAPSLCQPKEFLRPNSKLENVSAVSSVVLRTAVTSPHTVAGTDSSP
RSKLFSSTSKEFSFSEDKSDGVFERAELSLTQMFEVAESTIACIEAADMGFTQCMSSGSE
AVLASDPGSITNDAKSKTREGEDNQSPGMQLPPLCSRATHGSQLALSVKRNKDFNYIDVN
DKPHTMGATARNVTISSGFKTRPGKLESSLSSAKAMPAMCDEAINYKNMEPLKASSVGSS
ANHCDRGNRQEPAYIQQTGDMTAQPCSEARSKQPSKESVGNPAPVLSYAGGNSVKDSNVT
LMKPRAQPGAIISGFVTARGKPVYVQEQALNLAHKFLADGPTTLVQPVTNDSNVPTFFTT
GMGKTVTVSVDSLKQSKREHGSFKSGFTTAGGKPVYVQEDGIDRARQFLSEAGWNTPGEE
LATDSLPLLPTGGDGKTMKAFGDSVTKPKCQSGTVTSGFITAGGKPVHVQEEALSHSKQL
FAEASSDLPQKLQPSSFRTGTRKAVTASVDSLEKSKEQHGSLKSGFKTAAGKALYIQEEG
LNHARCLLRDDICRVPGEKSQENAVSTPLAGSEEKVAKDRVNSKTKPTAQPGTLTSGFAT
AGGKPVYVQKKSLGHSKQLFAEAPSDLPKKLQPSSFTTGTRKAVTVSVDSLEKSKEQHSS
LKSGFKTAAGKAVYIQEEGLSHACHLLRDDICGVPSEKSQENAVFTPLAGCAENVAKDRM
NSQTKLTAQPGTLASGFATAGGKPVYVQEEALTRARQLSSECPTASSRAVVQDNRVPTLF
TTGTGKAVTVSVDSLANSKEQHSSLTSGFASSEGEPVHVKEESVSHAHQLRSEAHTNVDD
RISQQNAIPTFFTTGSGKKLQVSAESLKAAEVLFDKKRDGLLTAPAEANSKENKVPTRPA
NPENSCHVLTSFKTGSEKAVSVSKKSLSSARTTLNVDGTDTSSGGGLHGSDRRSDPAVLS
GGESNRKPPALVSIMSDGTKKTQESFEPNQKLLNQDAKNSTPSTDKGHSAVDTGTHQVPS
EKRTPASAPGRFSHAGTPMFTSKMKSASKTSFVTPFKAVVLGKAQTPKAAPIIICGPRTL
FVDKSIRPGKLWILRRVMKATRLSLRDTLQGQHPKFYSLDQLKGYGVLDSTTTINSLNAA
DFVFYISSSNPLLILGDGATMQLESTEAYLGKDEFSSAFFKMPGVNTTLVPKGWLENHYR
WIVWKLASMELHCPQVFGGRSLTPDQVMLQLKYRYDIEIDNSCRSALRKIYERDDVPSKT
LVLCVSALEHKGDGAVQLELTDGWYSIRAELDEPLLRLASTGRLFVGLKLLTSGAELVGS
AEACTPLEASSDAALKLSYNSTRRARWDARLGYYAQPKPFPVSLASLHPKGGLVGRVDCL
VIRAYPVMYLEMLPNKMGVMRHEKEELIVAAKHEKVRTAFIEKMTAEVLSQVEKSDTEEL
RLSGIRLSYSVKQIQGLNSGRDIWKAIKNSSDPTEIERLLSEEQLRMLRCFQEEQLCSRQ
AIIQQKLESALQTAYEENKCPRERVVIPVLKVLLGGLHEADLRKNICCLMCVWRPTDDTR
EMLKQGEALSIYNINVTCSRQVLPDIQNSAVELTTTKMTQFEPAKCPDHVRIYYMRQVTS
FPVLLTESGSQGRAVDIVGFVLRVSHQKEGTVLTLTDTRFNFVQLVVSRKAWAAEESMNG
KFLSATDVTLRTGSADRIATLETTEFSVLTTSPASSSLRHALSALKASIKNPSDFATTAL
ARLQKPVHVNSPHVAPRPPCAPQQTTRLASPATPNNTAPVGEPAPISRTPTETRPSDDTD
GLSLPKGKTEVEPGSPADALSKQIHAKIEFLQRYAALAPIPVLPSPPSAKAKAAFRSVKK
QP
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgatgatgttcgaaaccaaccgcggttccgcatgtatgacgacgacgacgga
cacaagtccctgttcgaggcttttgtgtcgcacacggctaaagacttgggcccaatagat
gagaactggtttttcaaggagcgagcttcccaaatatcaaagtgcagccagttcgggagc
agcagcagtgtgtcatcaaacccctgcactccggtcacgtcttcgtgcttgtctcgaaac
gaaaatgagacaccagcttcttccacaaatactccagcatccatctgccagcgtaatgcc
agcttcctcgagtggactcccctttcgccttctccagttgtgccaagtgcattcaaaacc
ccgcgagtgccaaaatcttttccacaaacccttgcgataactaagaacacaccaagccct
ctatggtcaccctctttggaaacaccacctctccgtactgctcgaagcaaacaagacttg
aaagtatttgctccaaggaacttgtttcatccgccaagaaaaagccggcaaagtctgtca
tctgaaaatgaagacaatttagaagatgaaaattcaaagacgttttatctgacagagaag
agaacattgactcggtattgtggctccaaaaaagatgtgccccttcgtaagttggagatg
cagagtaacgaccttggtgctgaagacagtttccaaaagcatgttgaaggttgttgcgaa
attccacaagtcgactcaacacatagaggccagaattatgtgaaagtgactcccaagagg
cgtggctctcctgatgcttcgaggtcacgtgatgttggagccagaatagaaaaaagagct
aactttgtcaatccgtatgatcgcactgctcgtataaagcatcacttgaaagagaatggg
actcctcacattcacgtacctgacatgactgtcatcccaaaccaagctccttctctctgc
cagccaaaggagttcttaagacctaattcaaagttagagaacgtgtcagctgtttcatca
gtggttttgagaactgctgtgacaagtcctcacactgtagctgggactgactctagcccg
cgtagcaagttatttagcagcacatcaaaggaattctcgttttctgaagacaagagcgat
ggtgtttttgaacgagccgaactctcgctcacccagatgttcgaagtggctgaaagcaca
attgcttgtatagaggcagctgatatggggttcacccaatgtatgtcttcgggaagtgaa
gctgtgttggccagtgatcctggcagcatcactaacgatgccaaatcgaaaactcgtgaa
ggtgaagataatcagtcaccaggcatgcagctaccaccattgtgctctagggccactcat
ggcagccaattggcattatccgtgaaacggaataaagattttaattatattgatgtcaat
gacaagcctcacactatgggtgccactgctagaaatgtcaccatttcatctggctttaaa
accaggcctggaaaactagaatcatcactcagttctgctaaagcaatgcctgcaatgtgt
gatgaagcaattaattacaaaaatatggagccactgaaggccagctctgttggaagctca
gcaaaccactgcgacagaggaaaccggcaagaaccggcatatattcaacaaacgggtgac
atgacagctcaaccatgttctgaagctagatccaaacagccaagtaaggaatcagtagga
aatcctgcaccagtgctttcttatgctggtggaaattcagtaaaggactctaatgttact
ttaatgaaaccaagagctcaaccaggtgcaattatatcaggctttgtgacagctagaggg
aagcctgtgtacgtgcaggagcaagcactcaacctcgctcataagtttctcgctgacggt
cctacaacgctggtgcagccagtgacaaacgacagcaatgtgccaacattcttcacaact
ggaatgggaaaaacagtgacagtctcggttgactcactgaaacagtcaaaaagagagcac
ggctcatttaaatctggttttaccacagcaggaggcaaacctgtctacgtgcaagaggat
ggcattgatcgtgctcgccaatttctttctgaagctggttggaacaccccaggagaagaa
ttagcgacagattctctgcctttgctgccaactggtggtgatggaaagacaatgaaagcc
tttggtgactcagtaacgaagcctaaatgtcagtctggtacagtcacatctggcttcatt
actgctggaggaaagccagtgcatgtgcaagaagaagcactcagccactctaaacagctt
ttcgctgaagcttcatcagatttaccccagaaactgcagccgtcatcgtttagaactggc
acacgaaaagcagtgactgcatcagttgactcattggagaaatcaaaggagcagcatggc
tcacttaaatcgggtttcaagacagcagcaggtaaggctctctacatacaagaagaaggc
ctcaatcatgctcgttgcttactccgtgatgacatttgtagggtgccaggtgaaaaatcc
caagaaaatgctgtatctacgcctcttgctggtagtgaagaaaaggttgcaaaggacagg
gttaactcgaaaacaaagccaacggcccagcctggcacactcacttcaggctttgcaact
gctggcgggaagcctgtgtatgtgcaaaaaaaatcactcggccactctaaacagcttttc
gctgaagctccatcagatttacccaagaaactgcagccgtcatccttcacaactggcacg
cgaaaggcagtgactgtatcagttgactcattggagaaatcgaaagagcagcatagctca
cttaaatcgggtttcaagacagcagcaggtaaggctgtctacatacaagaagaaggcctt
agtcatgcttgccacttgctccgtgatgacatttgtggggtgccaagcgaaaaatcccaa
gaaaatgctgtatttacgcctcttgctggttgtgcagaaaatgttgcaaaggacaggatg
aactcgcaaacaaagctaacggcccagcctggcacactcgcgtcaggctttgcgactgct
ggcgggaagcctgtgtatgtgcaagaagaagcactcactcgtgctcggcagctttcctct
gaatgccccacagcttcatccagagctgttgtgcaggataaccgtgtaccaacacttttc
acaactggcacaggaaaagcagtgactgtctcggttgactctttggcgaattcaaaggaa
cagcacagctctctgacatcaggttttgcgtcaagcgaaggcgagcctgtacatgttaaa
gaagaatctgttagtcacgcccatcaacttcgctctgaagctcacaccaatgtggatgac
agaatttcacagcagaacgcgatccccacatttttcactactggttctggaaagaaactt
caggtttcggcagagtcattgaaagcggctgaagtgcttttcgataaaaagagggacggt
ctgctgactgctcctgcagaggctaactctaaagagaacaaagtccccacaagacccgct
aacccagaaaattcctgccatgttcttaccagcttcaagacaggatcagaaaaggcagtt
tctgtttcaaagaaatcactgtcaagtgctagaactactctcaatgttgatggcactgac
acatcctccggagggggccttcatggatctgatagaagaagtgacccagctgtattaagt
ggaggtgaaagcaatcgaaagccccctgcccttgtcagcataatgtcagatggcaccaag
aagacgcaggaatcattcgagcctaaccaaaagcttctgaatcaagacgcgaagaattcc
actccttccactgacaaaggccactcggctgtggacactggaacacatcaggtgccatca
gagaaaaggacgccagcgtccgctccaggcagattcagccatgccggaacgcccatgttt
acttcaaagatgaagtctgcatctaagacaagctttgttacgccattcaaggcagttgtt
ttgggcaaggcgcagacacccaaggctgcaccaataattatctgtggtccacgcacgttg
tttgtggacaagtcaattcggcccggaaagctctggatcctaagaagagttatgaaggcc
actcggctgtctcttcgagatacgctgcagggccagcacccgaagttctactcattggat
cagttgaaaggctacggtgtgctggattcaactaccactatcaattccctaaatgccgct
gactttgttttctatatctcttcctcaaacccccttcttatattgggagatggagccacc
atgcagctggagtccacagaggcatatttgggaaaggatgaattcagcagtgcctttttc
aaaatgcctggtgtgaacactaccctggttcctaagggatggctggaaaatcattaccgc
tggattgtgtggaagttggcatccatggagctgcactgccctcaggtgtttggaggaagg
tcactgacacctgaccaagtaatgcttcagctgaaatacagatatgatattgaaattgac
aacagctgccggtcagcacttcgaaaaatttacgagagagatgatgtcccaagcaagacg
ttggtgctgtgtgtatcggcgttggagcacaagggagatggtgctgtacagttggaactt
actgacggctggtatagcatccgtgccgagttggatgaacctctgttgagactagcttct
acgggacgtctctttgttggcctcaagcttctgacgtcgggggccgagcttgtgggctcc
gccgaggcgtgcacgccgcttgaggcttcctcagatgctgcattaaagctgagttacaat
tccacacggcgtgcacgctgggacgctcggctgggttactacgcgcaaccgaagccattc
cctgtctcccttgcctctctgcatcccaaaggtggcctcgttggaagggtggattgcctg
gtcatccgggcctatcctgtaatgtacctggaaatgctgccaaataaaatgggtgtgatg
agacatgaaaaggaagagctgatagtcgctgcaaagcacgaaaaagtccgaaccgctttc
atcgaaaaaatgactgccgaggttctctctcaggtggagaaatctgacacggaggaacta
cggctttctggcattcggttgtcgtactccgtgaaacagatccaaggactgaactccgga
agagatatttggaaagcaatcaaaaattcttcagaccccacggaaattgagcgactccta
agcgaagaacaacttcgtatgctgaggtgcttccaggaggaacaactgtgcagtcggcag
gcgattattcagcaaaagcttgaaagtgccttgcagacagcctatgaggaaaacaagtgc
cccagggagagagtcgtgatacccgttctgaaagtgctccttggtggccttcatgaggca
gacttgcgcaagaacatctgctgcctaatgtgtgtgtggaggccaacagacgacacccga
gaaatgctcaagcaaggcgaagccctctccatctacaacatcaacgtaacatgttcaagg
caagtgctgcctgacatccagaacagcgcagtggagttgacgacgacaaaaatgacgcaa
ttcgagccagcaaaatgccccgatcacgttcgcatttactacatgcgacaggtgaccagt
tttcccgtgctgctcacagagagtggctcacaaggcagagctgttgacatcgttggcttt
gtgcttcgtgtcagccaccaaaaagaaggcaccgtgttgacactgacagataccaggttc
aacttcgtgcaactggtcgttagcagaaaagcatgggctgcagaagagagcatgaacggc
aagtttctttcggcgacagacgtcacgctcaggacgggtagtgcagacagaattgccact
ctggagacgaccgagttctcagtgctgacgacttcccctgcaagcagcagtctccgccat
gccctttcagctctcaaggcctccataaagaatccatcggactttgccaccaccgccttg
gccaggcttcagaaaccggtgcatgtcaacagtccgcatgttgcaccaagaccaccttgt
gcacctcaacaaactacaaggctagcttcacccgcgacacctaacaacactgcacccgtt
ggagagcccgctcctatttcaagaactcccactgagacaaggccatcagacgacactgat
gggctttcactgccaaagggaaaaactgaagtggagccaggttcacctgccgatgcatta
tcgaagcaaattcatgccaaaatagagttcctgcagcgttatgcagcattggcgccgata
ccggtgttgccttctccaccttctgccaaagcgaaagcggcttttcgctctgttaaaaag
cagccctaa
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