Rhipicephalus microplus (southern cattle tick): 119170194
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Entry
119170194 CDS
T07403
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04080
Neuroactive ligand-receptor interaction
rmp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119170194
04082 Neuroactive ligand signaling
119170194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmp04040
]
119170194
Ion channels [BR:
rmp04040
]
Ligand-gated channels
GABA-A
119170194
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cyclin_N
DUF6768
DUF2448
Motif
Other DBs
NCBI-GeneID:
119170194
NCBI-ProteinID:
XP_037277173
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Position
5:25436312..25490235
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AA seq
562 aa
AA seq
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MSSDSSGGAGPGRALSTACPSSVTNHRSSRGQCGGWWSSTPTRQPLPQPLRRGTGTSSPA
LATVVCCFLVTWTRQAEGSRAARGVMANTSSLLDSLLSEKNYNRQFRPGFGGPPTEIFTD
ILIRSFGPVSENEMMFSMDCYFRQTWYDRRLSFHGDIKVLSVSWQFLELVWKPDTYFFNG
KSSYLHKVTVPNKFVRLFHDGRLMYSMRLTIKASCPMHLRKYPLDTQACPLEIGSFAYSS
KEVVFRWKGPEPVVISPDVTLSQYEFLSVTATNLSTYGPGGEVRSSLMTRFILSRRRGYF
ILQIYAPCSMIVGASWVAFWINRSDAAGRVAVGATTVLTLVTMGFGGRASLPKVDYATAL
DWFVIMCFTFVFTALVEYACVNYIERFLINRERKRLEVLAQKEERRELAKELTEPGHEET
VLDDGTSGSENVRLRLENADEDTVAAVLADAAEDASSRQGRLRAGVPTLGLARFGFRWWG
PKQRLGDSHPDTAYARCSRGGVAGPPASSREQRLTPSEVAGEMDAWARIIFPVTFTALKV
MYWTLFLYFVDDEIPEDPPPQN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggacagcagcggtggcgcaggccctggaagagctttgtcgactgcctgtccg
tccagtgtcaccaaccaccgctcctcccgtggccagtgcggcggatggtggtcctctacg
ccaacgcggcagcctttgcctcaaccgttgcgacgaggcactgggacgtcgtcgcctgcc
ttggccaccgttgtctgttgcttcctcgtcacctggaccaggcaggccgaaggcagccgt
gcagctcgaggcgtcatggccaacaccagcagcctcctggatagcctactgtcggagaag
aactacaaccgccagttcagaccaggattcggaggtcccccaacagagatcttcacggat
attctcatcaggagctttggaccggtgtcagagaacgagatgatgttctcgatggactgc
tacttccggcagacgtggtacgaccgtcgcctcagctttcacggtgacatcaaggtgctc
tcggtcagttggcagttcctggagctcgtgtggaaaccggacacgtacttcttcaacggc
aagagctcctacctccacaaggtcaccgtgccaaacaagtttgtccgtctgttccacgac
ggtcgactcatgtactctatgaggctcaccataaaagcaagctgcccaatgcacctccga
aaatacccactggacacgcaagcctgtccactggagattggaagttttgcctattcatcg
aaagaagttgtgttcaggtggaaaggcccagaacccgttgtaatatcacctgacgtcacc
ctgtcgcagtatgagttcctcagcgtgacagcgaccaacttgtctacgtatggacccggt
ggagaagtacgttcttcactcatgacccgcttcatcttaagccgtcgacggggctacttc
atccttcaaatctacgccccatgctctatgatcgtcggagcctcctgggtggcgttttgg
atcaaccgcagcgacgctgctggccgcgtcgctgtaggcgccaccaccgtgctgacactg
gtgacgatgggcttcgggggccgtgcgtcgctccccaaggtggactacgcgacggcgctc
gactggttcgtcatcatgtgcttcaccttcgtgttcacagcactcgtcgagtacgcgtgc
gtcaactacatcgagcgctttctcatcaaccgtgaacgcaagcggctggaagtgctcgct
caaaaggaggaacgccgagagcttgccaaggagctcacggagcccggccatgaggaaacg
gtgctggacgacgggacgtccggctcggaaaacgtgcggctccggctcgagaacgccgac
gaggatacggtggcggcagtgctagcggatgccgcggaagacgcctcctcgcggcaaggt
cgacttcgtgccggcgtccccacgctgggcctggcgcgattcggcttccgctggtggggc
ccgaagcagcggctgggcgacagccaccccgacacggcgtacgcacggtgcagtcgcggt
ggcgtcgccggtcctccagcgtcctcgagagagcagcgcctcactccgagcgaagttgcc
ggagaaatggacgcctgggcgcgaatcatctttcccgtcacgttcaccgcgctcaaagtc
atgtactggacgctgttcctctactttgtggacgacgaaatccccgaagacccgcctccg
caaaactga
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