Rhipicephalus microplus (southern cattle tick): 119170422
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Entry
119170422 CDS
T07403
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119170422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119170422
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119170422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
Motif
Other DBs
NCBI-GeneID:
119170422
NCBI-ProteinID:
XP_037277474
LinkDB
All DBs
Position
5:49084449..49130199
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AA seq
647 aa
AA seq
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MACGDVKQLVDQLLSTSITDSKEVSFKDKALKLDTEKDASVVVEAITRCPKLEMLCLEGN
TLGVDAAKAIGKALESCPNLKRALWKDLFTGRLRTEIPDAVRFLSSGMLLAKAKLTELDL
SDNAFGPIGAGALLPLLSSPVCFHLEVLRLNNNGLGTGGAEFLAKALTKCIEDSTKAGKP
LALRTLVCGRNRLENPGAIAMGAVFGKLHTLEEVALFQNGIYHEGIAALAKGLMSNKNLR
ILDLNDNTFTMKGARHMAQALRHLENLENINFGDCLLKTAGAKEIANSLKDGHNALKNVN
LGNNEITLDGGLAIVEALKGKPDLETLELDGNKFGPEGVNTLEAVMEAVGKIEALCAFSD
DEGVDDEEEEDDEEEGREEEGDSPVKGRFEKEYIEAGCSAEEFLLSPTAAKLAQLGSHRA
QNLLREVESTASGTDLIRSYVTAFMKVASVLGSGEEGDSGKRFAVDCADSLLSAAFGLAK
KENQLPGLTNEIVVNLGLIKAEKDHKVSWPASTTEGAMVLLAELVPKEYFASTAREALQA
FLSKPVAAKQLLRRVCSQDTAPVDAGLVPAMTKNTRCHGRRLTIDHLHHQTLLSFTPAAK
STLRMMAHLRYTDSDIAHVFIFILSASAFYIRVNRHLLSRAVQIAKL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcggtgatgtgaagcagctggtggaccagcttctttctacgtccatcacagat
tcaaaagaggttagctttaaagacaaagccctaaagttggacaccgaaaaggatgcgagc
gttgttgtggaagcaataacacgctgccccaagttggaaatgctttgtctggagggcaac
acgttgggtgttgatgccgcaaaggcaatcggcaaagcgttggaatcctgtccaaacctg
aagagagctttatggaaagacctatttacgggccgtctccggactgaaataccagatgct
gttaggtttctgagctccggtatgctactagcaaaggcaaaattgacggaacttgacctg
agtgacaatgcgtttggaccgatcggtgctggggcactgttgcctctcctaagctcaccg
gtctgcttccatcttgaggttctgcggttgaacaacaatggacttggtacagggggtgcc
gagtttttggcgaaggccctgacaaaatgtattgaggacagcacgaaggccggcaagcct
cttgctctgcggaccttagtttgtggccgtaacaggttggagaatcctggagcaatcgcc
atgggtgccgttttcgggaaattgcacacattggaagaggtggccttatttcagaatggc
atctaccacgaagggattgccgccttggccaagggtttaatgtcaaacaaaaaccttcgc
atactagacctcaacgataacacgttcacaatgaaaggggcccggcatatggcacaggca
ctgcgtcaccttgagaaccttgaaaatatcaacttcggtgactgcttgttgaaaacggct
ggggctaaggaaatcgctaattccttgaaagatggtcataacgcgctgaagaacgtgaat
ctgggcaacaatgaaatcacacttgatggaggccttgcaattgtggaggccctcaagggg
aagccagatttggaaacgcttgaacttgatggtaataagttcggccctgaaggagtgaac
acgctggaggccgttatggaggcagtgggcaagatcgaagcgctgtgtgccttcagtgat
gacgaaggtgtcgacgatgaagaggaggaggacgacgaagaagaaggccgcgaagaagag
ggtgacagccctgtaaaaggcagatttgagaaggagtacatcgaggctggctgcagtgcc
gaggagttcctgttgtccccgacagcagccaagctggcgcagcttggcagtcatcgtgca
cagaatttgcttcgagaggttgaatcgactgcaagtggcactgaccttattcgtagctat
gtaacagccttcatgaaagtggcgtcggtgctgggcagtggtgaagaaggtgactcggga
aaacgctttgccgtggactgtgcagactcgctgctctctgctgccttcggtcttgccaaa
aaggagaaccaattaccggggcttactaacgaaatcgtagtaaacctgggtctgattaag
gctgagaaggaccataaggtgagctggccggcatcgacaacagaaggtgccatggtccta
ctcgctgagctggtgccaaaagaatactttgccagcactgcgcgggaggccctccaagca
ttcttgtcaaagcctgtagcagccaaacagctgcttaggagggtctgcagccaagacacg
gcaccggttgatgcaggtcttgtaccagccatgacaaagaacactcggtgccacgggaga
cgtctcaccattgatcacctccatcatcagaccctgctcagcttcactcccgctgcaaaa
agcacattgcggatgatggcccatttacgatatacagatagtgacattgcgcatgttttc
atttttattctcagtgcatctgcattttatatacgagtaaatagacacctcttaagtaga
gctgtacaaatagcgaaattgtga
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