Rhipicephalus microplus (southern cattle tick): 119170436
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Entry
119170436 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119170436
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119170436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
119170436
NCBI-ProteinID:
XP_037277505
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Position
1:89257498..89260530
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AA seq
643 aa
AA seq
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MVVCASCGGEDFDEVSGLYYCTECNTQSQEVRVEQVDDEGAAPPPHVGRASPRRKETGNS
TPRERKHPYPTNELFNVILVRQVDALVLLGASAELRGVVCRLWMDYLVKLEAVSRVEDDE
WTPRIGVVNRWSDLRTVEELIGASETSERKRKKLQKALFGSGVTTRLTSRSSRYRKRLKN
RCDVTRTPNLDSDCEFEDELLATASEGEQASEDDVEDFRSTAAKEYLERVLRRGVDLHDK
KIGRETEVTVVTLQRLLCLLYLGVLITGDPILLTDILRWARDGHLPYLHVLKLLPEDAKL
WGQQWRTFVRLTMPTIDELATQAAHLAHFLGMRSELRQPPLLPIVMRLVADLNLPLEFVN
VCEEVLCTHPKMVPSWEVPPNRAAGSVPLFSPVCEVRAAAVLLLALKLTLGLNGSREVQL
SRAVEELTSRHPGANLFVWSRWEKHLRARLLLLRSSCYGFEPEDLDDIRDVGVLFRHPDS
APVDRSMVTKALREGMKKSFWEMHRRELFFRQVPATSFAVTPAVRFLCERTPVSSGLRAV
LEESFLDKDVTYLTRATHGIASVGGWAELCQSVPEFIAILGEGCDQYWTVALKRVYDLKY
SNVVQHSLPKTFLFLLEFMAAITHCHPKELYRDLLRIEAVFLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgtgtgcgtcctgtggcggcgaagacttcgacgaagtttcgggcctgtactac
tgcaccgagtgcaacacccagagccaagaagtgcgcgtcgaacaagtggacgatgaaggt
gccgcgccacctccacacgtcggccgggcttctccgcggcgcaaggagacgggcaacagc
acgccacgggaaaggaagcacccctacccgacgaacgaactgtttaacgtgatcctcgtg
cgtcaagtggacgcgctcgtattgctcggcgcttcagccgagcttcgtggcgtcgtgtgt
cggctgtggatggactacctggtaaagctcgaggctgtgagtcgcgttgaggacgacgag
tggacaccacgcattggcgtcgtaaaccgctggagcgacttgcgaaccgtcgaagaactc
attggggcctccgaaacgagcgaacgcaagcgaaagaaactccagaaagcgctgttcggg
tcgggcgtaacgacgcgactcacgtcgcggtcgtcccgctatcgcaagcggcttaagaac
cgatgcgacgtcactagaacgcctaatctcgactcggactgcgagttcgaagatgaactc
cttgccacggcttcggaaggggaacaggcctctgaagacgacgtggaggacttcagatcg
accgccgccaaggaatacctagagcgcgtgctaagacgcggagtcgacttgcatgacaaa
aaaatcggccgggaaactgaagtcaccgtggtgacgctccaacggctcttgtgcctcctc
tacctaggcgtgttgatcacgggagacccaatcttactgaccgatatactgaggtgggct
cgagacggccacctgccgtacctacatgtcttaaagctccttcccgaggacgccaagttg
tggggccaacagtggcggactttcgtgcgactgacgatgccaacaattgacgagctagca
acgcaggcggcccacttggctcactttcttggcatgcgcagcgaactgagacagccgcca
cttttgcctatcgtcatgcgcctggtggcggacctcaacctacctctggagtttgtgaac
gtgtgcgaggaagttctctgcactcatcccaagatggtacccagctgggaagtgcccccc
aacagagcagcaggctctgtgccccttttctcacctgtatgtgaagtcagggcagcagct
gtcctgcttctggccctcaagcttacgcttgggctgaacggaagcagggaagtacagttg
tctcgagccgttgaagaactgactagccgtcatcccggagcgaacctgtttgtgtggtct
cgctgggagaaacacttgcgcgccaggcttcttttgctgcgctcaagctgctacggcttc
gagcctgaggacctcgatgacataagagacgtgggcgtcctctttcgacatcctgacagt
gctcctgtcgaccgcagcatggtgacaaaggcactgagagagggcatgaaaaagtcattt
tgggagatgcataggagggaactcttctttcggcaggtgcccgccaccagctttgcagtc
acgccagccgtacgttttctctgtgaaaggacgccagtttcctcaggcttgagggcagtg
ctggaagaatcttttcttgacaaggacgtgacgtatctcacgcgtgccactcacggcatt
gcatctgttggagggtgggccgagttgtgccaaagtgtgcctgagtttatagccattctt
ggagagggatgtgaccagtactggacggtcgccttgaagagagtgtacgacttgaagtat
tctaatgtggtgcagcactcactccctaaaactttcctatttctattggagtttatggca
gccatcacgcattgccacccgaaagaactatacagggacctattgcggattgaagcagtg
tttcttcggtaa
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