Rhipicephalus microplus (southern cattle tick): 119170438
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Entry
119170438 CDS
T07403
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119170438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmp03036
]
119170438
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
119170438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
119170438
NCBI-ProteinID:
XP_037277504
LinkDB
All DBs
Position
5:complement(50258672..50291852)
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AA seq
731 aa
AA seq
DB search
MSSMTTISSCLQQANVLLQTAKQQPGKLSREHRKEKYPSLQQKLTELYLSECNFNLRNKN
LYNGSNLLAKLVSREKLNCLVLNLYAGNEGYSLMLKTKNGTETETIRLPYEESELLQYID
NEELPPILVDLLERSQAPVFYSGCIVVEVRDHRRCLPTMGTFATHYVLLRPTTQSVLCDV
GLVARGDGHSWSLEDKLYLEAALVMATAEPLCLEPTVGVAVVSNWLQHKKARLSNHMISR
MAKKHSQVAINRRKKLEQCATPPYLRAHDFITQYRKRVPASTPLPTMPSKADFWVQKRAT
MPVPQEIEVEKLARVKEPPKPTLDNTPLVVQEFVLETEPNTGKLTRVTILQRPTDEQFFG
RLYVDREGNNKGTSCEFNLGSQANVTRYLDQFREIFTEEGRKAVKITHFVPGKPPVVLDS
QSMSGGLDELCELSAVVPLTKAQGPLSQSPPVLAAAENRKEPVNMNILEPNHGHTVCPDD
ATSKPNQASSISNALLAQSPEVVSLPNISLSQNVGLHNLMSLTGVNLSSAIPVPISLTMV
PVTQSSMLVGATGSLHGQIQDTSVQNIQSAASVAQTTNVASMAPSAVIVSSGGMVNPVST
VLSPASGVLSVPLTVATLGAQTLTAQLVAPTLKAAPPQGVRSAPAPVSLLQVPGGQQTLP
LIGTLPRQMPPAAPNVVNSAAGPTTVHNQQLQMALQKQLQLQAHSTAPQQPSGGSSGAAA
RQRSRKKSGKT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgatgactacaatctcatcttgccttcaacaggcaaacgtattgttgcaaaca
gccaagcagcagcctggaaagttaagtcgtgaacatcgcaaagaaaaatacccgtcgttg
caacagaagctgactgagctctatttgtccgaatgcaattttaatttgaggaacaagaat
ttgtacaatggctcaaatctcctggcaaagcttgtgtccagagagaaattgaattgtctc
gtcctgaacctctatgccggcaacgaaggttactcgctcatgctgaaaaccaagaatggc
acagaaacggaaactattcgcctgccttacgaggaaagtgaactcttgcagtacatagac
aatgaagagcttccaccaatccttgttgaccttttggaaagatctcaggcaccagtattc
tacagcggctgcatagtcgttgaagtgcgagaccacaggaggtgcttgccaacaatgggc
acatttgccacgcactatgtactcctaagaccaacaactcagtctgtgctttgcgacgtg
ggcctggtggcacgaggcgacggccactcgtggagtctcgaggataagctctacctggag
gcggcactggtcatggccactgcagagccgctctgcctggagcccacagtgggcgtggct
gtcgtatccaactggctgcagcacaagaaggcgcgtctcagcaatcacatgatcagcaga
atggcaaagaaacacagtcaagtggccatcaatcgtcggaaaaagctggagcaatgcgcg
acaccaccgtacctgagggcacatgacttcatcacgcagtaccgaaaaagggtgccggca
tcaacaccgcttccaaccatgccttccaaggctgacttctgggtgcagaaaagggccacg
atgccagttccccaagagattgaggtggagaagctggcacgtgtcaaggaaccccccaag
cccacactggacaacacgccgctggtggtgcaggagtttgtactggaaacggagcccaac
acgggcaagctcacccgtgtaacgatcctccaaaggcccaccgatgaacagttcttcggc
cggctctacgttgaccgggaaggaaataacaagggcaccagctgcgaattcaatcttggc
agtcaagccaacgttaccaggtacctggaccagttccgagaaattttcaccgaggagggc
cgcaaggctgtgaagatcacccacttcgttcctggcaaaccacctgtggtccttgactcc
caaagcatgtctggtggcttggacgaactgtgtgaattgtcggccgtagtgccactcacg
aaggcacagggaccgctcagtcaatcgccacctgtgctagcagctgccgagaacaggaaa
gagccagtgaacatgaacatcctggaacccaaccacggtcacacagtgtgtcctgatgac
gctaccagcaaaccaaaccaggcatccagtatatcaaatgcactgctagcgcagtcgccg
gaggttgtcagtcttcctaacatcagtttatcgcagaatgttggcctgcataatttgatg
tctctgacgggcgtcaatttatcctctgcgattcccgtgcctatttcactgaccatggtt
cctgtgacgcagtctagcatgcttgttggagcaactggaagcctgcatggtcagatccag
gacacatctgtacagaatattcagtctgctgcgagcgtagcacagacaacaaatgtggca
tccatggcaccatcagctgtcattgtgtcctctggaggaatggtgaacccagtgtcaacg
gtgctgagccccgcgtcaggtgtgctctccgtgccgctgacagtggccaccctcggcgca
caaacactgacggctcaattggtggcacccaccctgaaggctgcacctcctcagggcgtt
cgcagcgcacctgcacctgtctctctgcttcaggttcctgggggccagcagacactgcca
ctaattgggacactgcctcggcagatgcctccggctgcaccaaatgttgtgaacagcgct
gcaggaccgacaactgtgcacaatcagcagctgcaaatggctctgcagaagcagctacaa
cttcaagcgcacagcacagctcctcagcagcccagtggaggcagcagtggggctgccgca
aggcaacgcagccgtaaaaagtctggcaaaacatag
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