Rhipicephalus microplus (southern cattle tick): 119170461
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Entry
119170461 CDS
T07403
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119170461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119170461
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119170461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
CR6_interact
Motif
Other DBs
NCBI-GeneID:
119170461
NCBI-ProteinID:
XP_037277531
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Position
5:complement(52114290..52144145)
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AA seq
575 aa
AA seq
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MFGTPAKPTGFTGFGTPTTTAATFGTGTPGVGFGATPAAGSTPAASGFNMTFGQPATTAT
PGTGLTFGQPAAPAGTAATTTTAFSFGQPVAGTGFGFGAQPSTAAPTFNFGGTTTTTTAP
TFSFGAATTTAGSTGFQFGGFGANTTTTQSNPFGSTSLVSTGFGTSAVPSFGGAAPAAGT
TAAAASNLTNLATALSLPTVFNDERDNILAKWNQLQAFWGTGKGFFSATAPPVVFTTENP
FCRFKAIGYSRLPQAKPEDGLLALLFEKKLEDVQPMQAQLVEGLQRALGNKPNVAVCVEG
LKSLEANRCELVVYVMERAPTGQTRRFPSNEVVSYLEQATVKPQLTNMGVHSVISKAAAT
KDWLKAYLSSPPCGIDSLLWEQAKLDNPDPERLIPVPMIGFAELRRRFKLQEHEIKQHQC
RLDAIAEDISKLQIQHSNMIAKIEEHKRKQQNLYHRILKVMVHHEVSRKMGFAIQPEEEQ
LRTKLESILAELSAPTQFRGRLNELMSQIKLQNNQMTFTDTTIHCSLDPNSLSQLKEHLH
NQQKGIFELVKIIKGDLEELKEMESSLQGTAAPRR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactcctgcgaaaccaacgggcttcaccggatttggcacacctacgactact
gcagcaacattcgggaccggcacgcccggggttggctttggtgcaacaccggcagcaggg
agcacacctgcagccagtgggttcaacatgacgttcggacagcctgcgactacagccaca
cctggcacggggctaacatttggccaacctgctgcgcccgccggcacagcggctacgaca
actacggcattttcatttggccagccggttgccggtactgggtttggattcggcgctcaa
ccaagcacagcagcaccgacgtttaattttggcggcaccacaacgactacaacagctcca
acattctcatttggggctgcgacaacaacggctggtagcactggctttcagtttggaggg
tttggtgctaacacgaccacaacgcaaagcaacccctttggaagcacttcgctagtttcg
acaggattcggcaccagtgcggttccctcgtttggcggtgctgcccctgcggccggtacc
acggcggcagctgccagcaacctcaccaacttggcaacagcattgtcgctgcccactgtg
ttcaacgatgagcgggacaacattttggccaagtggaatcagctacaggcattctggggc
accggcaagggtttcttctctgcaacagcacctccggtggtattcactaccgagaacccc
ttctgccgattcaaggctatcggctatagccggctgccgcaagccaagccagaggatggc
ctgctagcactactgtttgagaagaagctggaagatgtgcaaccaatgcaggcgcagctg
gtggagggccttcagcgcgcattgggcaacaaaccaaacgtcgctgtctgtgttgaaggt
ctcaagagcctcgaggccaacaggtgcgagctggttgtgtacgtaatggagcgcgctcca
acgggacaaacacgacggtttccctcgaacgaagtggtgtcttacctggaacaggcaacc
gtgaagccccagttgaccaacatgggagtgcactcagtaatctccaaggcagcagccacc
aaggactggctaaaggcctaccttagcagcccgccctgtggcatagattcattgctgtgg
gagcaggccaagctggacaacccagacccggagcgactcatccccgtgccaatgattggc
tttgctgagctccgccgtcgcttcaagcttcaggagcacgagatcaagcaacaccagtgt
cggctagacgcaattgctgaggatatctctaagctccaaattcagcactccaatatgata
gcgaaaatcgaagagcacaagaggaagcaacagaatctgtaccacaggatactcaaggtc
atggttcaccacgaagtcagccgcaagatgggcttcgcaatacagccagaagaggagcag
ctgcgaacaaagctggagtccatcctggctgaactcagcgcaccgacacaattcaggggc
cgcctgaatgagttgatgtcgcagatcaagctgcagaacaaccagatgacattcactgac
acgacgatacactgcagccttgatcccaattcgctgagtcagctcaaagagcacctgcac
aatcagcagaagggcatctttgagttggtgaaaattatcaagggcgatctcgaagaactg
aaggaaatggaaagcagtctccaagggacggctgctccaagaagatag
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