Rhipicephalus microplus (southern cattle tick): 119170470
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Entry
119170470 CDS
T07403
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119170470
03036 Chromosome and associated proteins [BR:
rmp03036
]
119170470
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119170470
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119170470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119170470
NCBI-ProteinID:
XP_037277542
LinkDB
All DBs
Position
5:complement(55114255..55225133)
Genome browser
AA seq
1620 aa
AA seq
DB search
MEEELKAADQQAERGPGELRADIRRRESVSTVDMSSSDEDGDNVGKVARRLKKSARKASR
GDAASVDADSRATESFPSSGEGENKQSTPQESVRRKKRTSLSEDVKARRALIRSLHYTSK
SSSEDELDDPLTSMLRTPKQRSPRKRRRKSSSSGVQLSESASKCLEKASEKYGDPKLAMA
VSVEIQRLDIDPSIIAAAKMEIEDSMDEEEKEIARLLAPIRMPRKAPKKEASDAEIKGAP
ESEAGEVENKTKKLRGPKSKRKVSDSSDDFDEDDEVVACGSIMDIPGASFMMSKNTTRKD
PLQEALLERILQSASEESSEDEIVEPEECKKKRKKEAKEGDTEEAKATEVPVEETKEKVS
EKEGSGGSSSEEIVRKKKPGKYEKLLRKNVFAELDELEPKKETSKESDKEEAAVKPPKVK
ASKKRKIVYSDDDDAADKQPTSSSLESSSSDQSESDSSVGFAPARKRKGKNAKKTAKASS
DGSDFAVGKSKKGGASSSSDANKRKKKRKRIRMACSTADENDDDDDSCVEIIPGPSQEAD
GKGRKNIRKLISDKKLTEETKAAALAEEERKKRIAERQKLYNEALGKGPTEADTKVKQLV
LEVDLKSKKPLVEVDEALVKSMKPHQVKGVKFMYDCLIESLEMLKKDPIKGSGCILAHCM
GLGKTFQVISFLHTVMTHKVSGPLLRTALVVCPYNTVLNWANEFELWLDGNDLDMKIYET
SSIRVNSVRLEVLDRWQKKGGVAIIGYDMFRRFVNMRGKGKKLQEGFRRVLLDPGPSLVI
CDEGHVLKNDSTGLSKAMGEMKTGRRIVLTGTPLQNNLQEYHCMVSFVKPGLLGTKREFL
NRFVNPIANGACADSTVHDVKLMKKRVHILHRLLDGCVQRCDYSALAPFLPPKCEYVISV
RLSEVQVALYKHFLEHLARGRQKQAGAGTSLFWDFNMLRNIWTHPMLLELSAERLAKKEL
LKDDESDMASFIDDGSVSEKSSSESDGNDAVICLDDDEGPKTRSQRRAKKKDDSDRDEKK
ENDKGDKSSDDEVISTWQTRSRGNPDERPPTPPKQEKKEWWDQYVSEEDMEKLQISGKMS
LLYNILQECDAIGDKVLLFSQSLLTLDMVERLLEHCDERAAAVDPDTALVDPTDPLRDCH
NTWVRGIDYFRMDGSTSVDLRARWIEMFNDEDNPRGRLFLISTKAGSLGTNLVGANRVVL
MDASWNPTHDIQAIFRVYRFGQKKPVFIYRMLAQGTMEEKIYDRQVTKQSLSCRVVDEQQ
IERHFNASDLLELYNFTPDSKSNRPTPMVPKDRLLAELLIRNKNWIVSYHEHDSLLQNIT
SEELTEEERMLAWEEYRNEREGRINSNIADLPTSITSEGMGQTFTLSLDLNRMIADIKTK
YPYLTPNQLVDQLRKVLLAYRQEFQQRQMSAFEKRNMFLQAKQPVPNEVATQLTESSLAI
QQLNRVLAKLQGLGAQQQETSQQQYYQQQAYLQQARAQAQAAQAQAQAAQAAQAQAQARA
QFSQQQARYQFQQRQQQHRMPQAGARLSQAQQIYTNAYNYCISQGVTHAAASRYALNQQR
VAFQQLLMQQQMQQQMRNRPAPQSVVISEVEDDAEVAGSSSSSGTRQPPSSSVVITEVID
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagttgaaagcagcagatcaacaggcagaacgaggccctggagaactccgg
gcagacattaggcgccgtgaatctgttagcactgttgacatgagttcaagtgacgaagat
ggcgataacgttggtaaagtagcaagaagattgaagaagagtgcaaggaaggcaagccgt
ggcgatgccgcctctgtggacgcagacagccgagcaactgagagctttccaagttccggg
gagggcgaaaacaagcagtcaacaccgcaggaatcagttcgacgcaaaaagcgcacttca
ctgagtgaagacgtgaaagcccgccgtgccttgatacgaagcctgcattacactagcaag
tcatcgagcgaagacgaacttgacgatcctttgacgagcatgctccgtactccgaaacaa
aggtctccaagaaagaggcggcgcaagtccagcagttcgggtgtgcagctgagcgaatct
gcgagcaagtgccttgaaaaggcttccgagaaatatggtgacccgaagctggcgatggct
gtctctgttgagatacagcgactcgacattgacccctcgataattgctgcggcaaagatg
gaaattgaagacagcatggatgaggaagaaaaagaaatcgctagactccttgctccaata
aggatgcctcgaaaggccccaaaaaaggaggcatctgacgctgaaatcaaaggagcacct
gaaagtgaagcgggggaggttgaaaataaaacaaagaagctgagaggtcccaaaagcaaa
aggaaagtgtcggactcgagcgatgactttgacgaggacgacgaggtggtggcctgtggg
agtatcatggatatccccggagcatcgttcatgatgtctaagaatactacacgaaaagac
ccactgcaggaggccttgcttgagagaatcctgcagagcgcttcagaagaatccagcgaa
gatgaaatcgtggaaccagaggaatgcaaaaagaaacgtaagaaagaagcaaaggaaggc
gatacagaagaggccaaagccaccgaagtaccagtagaggagacgaaggaaaaggtgtct
gagaaagagggcagtggtggtagctcttctgaagaaattgtgaggaaaaagaaacctgga
aagtacgagaagctcttgcgaaaaaatgtgtttgccgagcttgatgagctcgagccaaag
aaggaaacaagtaaggagtctgacaaggaagaagccgctgtgaagcctccgaaagtgaaa
gcttcgaagaaaagaaaaatcgtgtacagcgatgatgacgacgctgcagacaagcagcca
acaagcagctcactcgaatcttcttccagtgaccagagtgaatcggatagcagtgtaggc
tttgcgcctgcccgcaagagaaagggcaaaaatgcaaaaaagactgccaaagcttcttcg
gatggctctgactttgcagtaggcaagtctaagaaagggggggcctcatcatcttcagat
gcgaacaagcggaagaaaaagcggaagcgcatcaggatggcttgttctacagctgatgag
aatgatgacgacgatgacagctgtgtggagataatccctggccctagccaagaagcagac
ggcaaaggtcgtaagaacattcgcaagctcatctccgacaagaagcttaccgaggagact
aaggccgcagcactggccgaagaggagaggaagaaacgcattgcagaacggcagaagctg
tataatgaagctttgggcaaaggaccgaccgaggctgacacgaaagtgaaacagctggtg
ctcgaagtggatctgaagtccaaaaaaccgcttgtggaggttgacgaagcccttgtcaag
tccatgaaacctcaccaagtcaaaggtgtcaagtttatgtatgattgtctgattgaatca
ctggagatgctgaagaaggaccccataaaaggatcaggctgtattctggcccattgcatg
ggtctgggaaaaacatttcaggtgatctctttccttcacactgtgatgacgcacaaagtg
tcggggcccttgcttcgcacggccttggtcgtgtgcccatacaacactgtgctgaactgg
gcaaacgaatttgagctgtggttggacggaaacgatcttgacatgaagatatacgagacg
tcttccatcagagttaatagcgtcaggttggaggttcttgatagatggcagaagaaaggt
ggtgtggccatcatcggctacgacatgtttcgtcgatttgtaaacatgaggggcaaaggc
aagaaacttcaggagggcttcagaagggtgctgcttgatccaggaccaagcttggtgatc
tgcgatgaaggacatgtattgaagaatgatagcactggcctgtctaaggcgatgggtgaa
atgaagactggtcggaggattgtgctcactggaacccccttgcagaacaacctacaagag
tatcactgcatggtgagctttgtcaagcctggtctgttgggaacaaagagagagttcctg
aaccgatttgtgaaccccattgccaacggagcatgtgcagactcaacagttcatgacgta
aagctgatgaaaaaaagggtgcacatcctccatcgccttttggacggatgtgtgcagcgc
tgcgattacagtgccctggctccattcctgccgcccaagtgcgagtacgtgatcagcgta
cggctgtccgaggtgcaggtggcgctgtacaagcactttttagagcaccttgctcgtggc
cgccagaaacaggccggagccggcacgtcgcttttctgggacttcaacatgctacgcaac
atctggacgcacccaatgctgctcgagttgagcgccgaaaggctcgctaaaaaggagctt
ctcaaggacgacgagagtgacatggcctccttcattgacgatgggtcagtgtcagaaaag
agctcttcagaatcagatggcaatgatgctgtcatttgtttggatgatgatgagggaccc
aagacaagatcccagaggagggcaaaaaagaaggacgacagtgaccgggatgagaaaaag
gaaaatgacaaaggtgacaaaagcagtgatgacgaagttatatcaacatggcagacaaga
agccgaggtaatccagatgaacggccgcccacaccaccgaagcaagagaagaaagaatgg
tgggaccagtacgtttctgaagaagacatggagaagctgcagattagtgggaaaatgagt
ctgctgtacaatatcctccaggaatgcgatgctattggtgacaaagtgttactgttcagc
caaagcctgctgactctcgacatggtggagaggctactggaacattgcgatgaacgagcg
gctgctgtggatcccgatacggcccttgtggatcccacagatccgttgcgtgactgtcac
aacacgtgggtgcggggcatcgactacttccgtatggatggctcaacatcagtggatttg
cgtgcgcgctggatcgaaatgttcaacgacgaagacaaccctcgcggccgcctgttcctc
atctcaacaaaggcgggctcactggggaccaacctcgtcggtgccaaccgtgtggtgctc
atggatgcctcatggaaccccacacacgacattcaggccatcttccgggtgtatagattt
ggccagaagaaacccgtcttcatctaccgcatgcttgcacagggaacaatggaggagaag
atctacgatcgccaggtgaccaagcagtccctgtcgtgccgcgtcgtggatgagcagcag
atagagcgccacttcaatgcgtccgaccttctagagctctacaattttactccagacagc
aaaagcaatagacctacacccatggtgcctaaggaccggctcttggcggagctgctgatt
cgcaacaaaaactggattgtatcctaccacgagcacgactccttactccagaacatcact
tctgaagaactcacggaagaggagcgcatgcttgcgtgggaagagtacaggaatgagcgc
gagggacgaatcaactccaacattgccgacttgcccacgtctatcacttcggagggtatg
gggcagaccttcacgctctcactggacctcaataggatgatagctgacattaaaaccaag
tacccatacttgacacctaatcaactggttgatcagctaaggaaggttctgcttgcatac
cgtcaagagttccagcagcgacaaatgagtgcatttgagaaaagaaacatgttcctccag
gcaaagcaaccagtaccaaatgaagtcgcaactcaacttacggaatcaagcctggccatt
caacaattgaatcgggtccttgctaaacttcaaggacttggagcgcagcaacaagagaca
tcgcaacaacagtactatcaacagcaggcttacctgcagcaggctcgggcacaagcgcaa
gcagctcaggcacaggcccaggcagctcaggcagctcaggcacaggcccaggcacgtgct
caattttcacagcagcaggcccgctaccagttccagcagaggcagcaacaacacagaatg
ccacaagcaggggcacgcctatcacaggcacagcagatctataccaatgcgtacaattac
tgcatcagtcaaggggtcacccatgctgcagcgagtagatatgccttgaaccagcagcga
gtagccttccaacagctgctcatgcagcagcaaatgcagcagcaaatgcgtaaccgccct
gcaccacagagcgtggtcatctccgaagtagaggacgacgcggaagttgccggctcgtcg
tcatcttccggcacgcgacagccaccgtcgtcgtcagttgtgatcacggaggtcatcgat
tga
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