Rhipicephalus microplus (southern cattle tick): 119170560
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Entry
119170560 CDS
T07403
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmp03036
]
119170560
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119170560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
119170560
NCBI-ProteinID:
XP_037277649
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All DBs
Position
5:75980224..76013196
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AA seq
968 aa
AA seq
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MFYAHFVLAKKGPLARIWLAAHWDKKLTKAHVFETNIESSVEGILQPKVKMALRTSGHLL
LGIVRIYSRKAKYLLADCNEAFIKIKMAFRPGAVDLPEEGRQAALSTITLPEVFHDFEAT
MPDLSNIDMEAAVTLNQSRAEDITLKEDYGSLSLINDDNFGDMGFDDPEMAREATNIDEA
FDQASLLLGGSMLGRPSEVPRGGPSSADNEAGASSSTTENSALAAMPVPGESMEAGRNAR
EGEADPFGTAAASTEAEAAEGAREGALLEGEPSGLFEPAGLFDDAPLGHVPLDTSGSDRD
GPLGAPGPVPSGPDARPADESDDDDDMYDMGPPSMGAPSGPSSPGSSVGDARDLDGGATT
SAAVGVAGPSSSSAMPGMDDGLLDQQQQEQAAMPPPPQPPSADSAPMGGVDVGPGEQTTL
LNNEDESFALAPLDTTVVQGVEKARAKRKRKLIVDEVKNISGEEMKSQLSDTSDIVTTLD
LAPPTKRLMHWKETGGVEKLFALPGRPILSKTLSRLYQRHLTTRAVENELAAGEEHLLQQ
LDDEQDNIGEQPQQMVQHDEHMQENSLGHHTKRRRLEEDLVVPHGAVNDQSAHHYDLGAP
DFPHGGPPSHLGPPSVDHYAASMVPPLQHQEYQQPLPQTPLQDGWPTPADYTYAQPPHTP
VPDYTAAYQMQQQQQQQAAMMAHHPMAAMHHPHHQQQLTPAPHLEEEHHQHHSLHHQAAA
ALFPTLQPDQLQSEYPVHPATPVPTPQSPPAAMMPPAAQMGPPPTPQMMPPHTPQMQHQQ
PAQEESPSMDQPLAPPSEFDALVASSSGLHGFGAPMESTSVEQHHLEEPEPQAEPQPEPH
TSAEEQQHQQQQQQDQLAQLDDDDEDYGPPASVGPAEEQLADETYEQFEERILNKRTVHM
LHMIRSPLEAGRQVRFSDVARGSNRKQVAQKFYTFLVLKKQQAVELRQESAFAELYIEKG
PKFEQSLL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcacactttgtgttggccaagaagggcccgctggcacgcatctggctagcg
gcccactgggacaagaagctgaccaaggcgcacgtcttcgagaccaacattgaaagcagc
gtcgagggcatcctacagcccaaggtgaagatggcgctgcggacgtccggccacttgctg
ctgggcatcgttcgcatctactcgcgcaaggccaagtacctgctggccgactgtaatgaa
gcgttcatcaagatcaagatggccttccggccgggagcagtcgacctacctgaggagggc
aggcaggctgctctcagcaccatcacgttgcccgaggtgttccacgacttcgaggccacc
atgcccgacctcagcaacattgacatggaagcggcagtgacgctgaaccaaagccgcgcg
gaagacatcacactcaaggaggactatggctctctcagtctcataaatgacgacaatttt
ggagatatgggctttgacgaccccgagatggcccgtgaggcgaccaacatagacgaggcg
tttgaccaggccagccttttgctgggagggtctatgctggggcgtccctctgaggtccct
cgtggtggcccctcttcagccgacaatgaggccggtgcgtcgtcttcaaccaccgagaac
tcggctctggcagcgatgccggtgcctggggagtccatggaggctggaaggaacgctcgg
gaaggggaagcggatccgtttggaactgcggctgcgtcgaccgaggccgaagctgccgag
ggtgccagagaaggggcactgcttgagggtgaaccaagtggcttgttcgagccagcgggg
ctcttcgatgatgcgccgcttggacacgttcccctggacaccagtgggtcagaccgggac
ggccccttgggggctccgggtcccgttccatctggtcctgatgcccggcctgctgacgag
agtgatgatgatgatgacatgtatgatatgggtcctccgtcaatgggtgccccgtcgggg
ccgtccagtcctggaagttcagtaggtgatgcccgggacctcgatggaggcgccacgaca
tcggctgctgtaggagtggccggtccgtcatcctcttcggcgatgccgggcatggacgat
ggcctgctcgatcagcaacagcaagaacaggctgcgatgcccccgcctccgcagccccct
tccgcagactctgctccgatgggtggcgtcgacgttgggcccggagagcagaccactctg
ctcaacaatgaggacgagagctttgctctagcaccgttggacaccaccgtagtgcagggt
gtggaaaaagcccgcgccaagcggaagcggaagctgattgtagacgaggtgaagaacatc
tcaggcgaggagatgaagtcccaactgtcggacacgagcgacattgtgaccacgctggac
ctggcgccacccactaagcggctcatgcattggaaggagaccggaggagttgagaagctg
tttgcactgcccggccggccgatcctgtccaagactctgtcgcgtctctatcaacggcat
ctgacgacgcgtgccgttgaaaacgagctggctgcaggggaggagcatctgttgcagcag
ctcgacgatgagcaggacaacattggcgagcagccgcagcagatggtgcagcacgacgaa
cacatgcaggagaacagccttggccaccacactaagcggagacgcctggaagaggacctc
gtggttccccatggtgcggtcaacgaccagtcggcccaccactacgatctcggcgcaccc
gactttccccacggcggccctcccagtcacctggggccgccttccgtggaccactatgcg
gcgagcatggtccctccgctgcagcaccaagagtaccagcagcccctgccgcagacgccc
ctgcaggacggctggcccacacccgctgactacacgtacgcccagccgccacacacgccc
gtgccggactacacggcggcgtaccagatgcagcagcagcaacagcagcaggcggccatg
atggcccaccatccaatggcagccatgcaccaccctcaccaccaacagcagctgacgcct
gcaccgcaccttgaagaagagcaccatcagcaccactccttacatcaccaggcagcagcg
gcactcttcccgacgcttcagccagaccagctgcagtctgaatacccagttcacccagca
acacctgtgccgacaccacagtcacccccagccgccatgatgcctcctgcagcccagatg
ggcccacctccaacaccgcagatgatgcctccacacacgccacagatgcagcatcagcag
ccagcacaggaggaaagtccaagcatggaccaacccctagctccgccatctgaatttgac
gccctggtggcgtcgagttctgggctgcacggtttcggggcacccatggagtcaacgtca
gttgagcagcatcacttagaagaaccagagccccaggcagagccgcagccagagccccac
acgtcagctgaagagcagcagcaccagcagcagcaacagcaggaccagttggcccagctg
gacgacgacgatgaggactacgggcctcccgcgtctgtcggaccagccgaggaacagctg
gccgacgagacgtacgagcagttcgaagagcggatactgaacaagcgcactgtgcacatg
ctgcacatgatccggtcaccacttgaggcaggtcgccaagtgcgcttcagtgatgttgca
cgaggcagcaatcgcaagcaggttgcgcagaagttctacaccttcctggtgctgaagaag
cagcaggccgtcgagctgcggcaagagagcgccttcgccgagctctacatcgagaaagga
cccaagttcgagcagtcattgctctag
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