Rhipicephalus microplus (southern cattle tick): 119170624
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Entry
119170624 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119170624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119170624
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
119170624
Prokaryotic type
Archaeal type
TFB
119170624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
119170624
NCBI-ProteinID:
XP_037277739
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All DBs
Position
5:complement(89929135..89931654)
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AA seq
315 aa
AA seq
DB search
MASGSRGPNSRVFCPDHPDAALVEDYRAGDMICPQCGLVVGDRIVDVGTEWRVFSNEKSN
SDPARVGASENPLLNGSDLATMIGKGTGDASFDESGTAKYQNRKTMSSADRALMNAFREI
SNMADRINLTKTIVDRANLLFKQVHDGKTLKGRSNDAIASACLYIACRQEGVPRTFKEIC
AVSKVSKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPSSVQKAATHIARKAVE
LDIVPGRXPISVAAAAIYMASQASEDKKSQKEIGDIAGVADVTIRQSYKLMYPRAAELFP
KDFKFFTPIEQLPQS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggtctcgcggtccaaactcccgggtgttctgccccgaccacccggatgcc
gcgttggtggaggactacagggcgggcgacatgatctgcccgcagtgtggactcgtcgtc
ggcgacaggatcgtggacgtgggcacggagtggagagtgttctccaacgaaaagagcaac
agcgatccggcccgagtcggagcgtccgagaatcctctgttgaacggcagcgacctggcc
acgatgattggcaaaggaacgggagacgctagcttcgacgagtccggcacggcaaagtac
cagaaccgcaaaaccatgagcagcgcggaccgagcgctcatgaacgcgttccgagagatc
agcaatatggcagacaggatcaacctgaccaagaccatagtggaccgagcgaaccttctc
ttcaagcaggtccacgacggcaagacgctgaaagggcgcagcaacgatgccatcgcgtcc
gcgtgcttgtacatagcttgccgccaggaaggggtgccgcgcaccttcaaggagatatgc
gccgtgtccaaagtctccaaaaaggaaatcggccgttgcttcaagctcattctcaaggct
ctggagacgagcgtggaccttatcacgaccggagacttcatgtcccggttctgttccaac
ttgggcctgccttcgtccgttcaaaaggccgccacgcacatcgctcgcaaagccgttgag
ctggacatcgttcccggtagangtcccatttcggtggcggcggctgccatctacatggcc
tcgcaggcctccgaagacaagaagtctcaaaaagaaatcggcgacatagctggcgtggct
gacgtgaccatacgacagtcgtataagctcatgtacccccgcgctgccgagctgttcccc
aaggacttcaagttcttcacacccattgagcagctgcctcagtcatga
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