Rhipicephalus microplus (southern cattle tick): 119170850
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Entry
119170850 CDS
T07403
Symbol
Rnp4F
Name
(RefSeq) RNA-binding protein 4F
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119170850 (Rnp4F)
03036 Chromosome and associated proteins [BR:
rmp03036
]
119170850 (Rnp4F)
Spliceosome [BR:
rmp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119170850 (Rnp4F)
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119170850 (Rnp4F)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_7
LSM_int_assoc
RRM_occluded
RRM_11
Lsm_interact
RRM_10
TPR_14
DUF8400
Motif
Other DBs
NCBI-GeneID:
119170850
NCBI-ProteinID:
XP_037278032
LinkDB
All DBs
Position
3:complement(138552677..138613544)
Genome browser
AA seq
946 aa
AA seq
DB search
MAGAEEDLSDEMETNHDMNEDDVISDGSSCSDDDKDADAEEEKQIEELQAKITANPYQYD
SHTALIAYLRNTGNLERLRDAREAMAKIFPLTPELWLEWIKDESTLCEGDEEKEKVLPLF
ERAVQDYLSVALWLEYAQFSIGLMNAEKGLERVRQVFERAVTAAGLHVSQGALLWEAYRE
FEICLLSTVQVGASEESTQEQREQYVAQRNRVYSLFKRQLSVPLFGMEKTYGELKEWSEA
AIEPAVDQLYKKAKLKLEKIQEYETALLCEDDKGVPDLSLYLPYLEWEQSQGDPARIQCL
YERALAQHCLVADLWERYMAYLDNQLKVESVSLPCHERSVRNCPWSANLWASYLKALERS
RAEHSKVKETMEQALQAGFSQGQDYQRLWLAFLDYLRRRIEAHSVQGDELLAPYVEDLRA
AFQKAVEHLLQYAATEGDVCGPVLKYWAKVEAKVCHNLPRARELWNDITNQGRATDAQTW
LDYANFERTFGDDKHYRKVLFRGMYAAVDWPETLGDLLLLFEREEGTLETLDTATEKYDA
HMRRVLDKREKAAAREAAREAEQEAQKKIHRAEKKAEKKAERHAERRREAEAKVFQRETP
GQAKRKAQPPEPPDAQEQATDKDGFKVPSVPAAKATAVEGPPSKKQKTEGEEQGEEKKEK
PKHGEVVKPDPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKGRSKGFGY
LVFTHMQSVEGALKRDRTPVNGRPVFVSKCNERNQFRFRTGMEKNKLFVKNIPFSVTEKE
LEELFGKYGELKGVRLVTYRNGHSKGIAYVEYANETSATVALVQTDGMTMGNQALQVAIS
NPPARGYRQQGKEDGAEDGQQKAQYPLASQVASLGGGPKETGLRGRGRTQVSLMPRALQQ
RSSTAVVKKPEPKREQQEQPMEVSGSSSEGSKGLSNDDFRSMLLKK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccgaagaagatttaagcgatgagatggaaacaaaccacgacatgaatgaa
gacgatgtaatctcagacggcagctcttgctcagatgacgacaaggacgccgatgccgag
gaagagaaacaaatcgaggagttgcaagcaaagatcacggccaatccttaccagtacgat
agccacacagctctgatcgcctacttgcgtaacacgggaaacctcgagaggctgcgcgat
gcgagggaagcaatggccaagattttccctcttacgcctgagttgtggctggagtggatc
aaagacgagagtacgttgtgcgagggtgacgaagaaaaagagaaggtgctgccactcttc
gagcgagccgttcaagactacctgtcggtggccctgtggctggagtatgcccagttctcc
attggcctaatgaatgccgaaaaagggctcgagcgggtgcggcaggtgttcgagcgtgca
gtcaccgctgctggccttcacgtctcccaaggcgctctcctgtgggaggcctaccgcgag
tttgaaatctgcctcctatctaccgtccaggtaggtgcgagtgaagagagcacgcaggag
cagcgggagcagtatgttgctcagaggaaccgcgtctacagcctcttcaagaggcagctc
tcggtcccacttttcgggatggagaaaacgtacggagagctgaaggagtggagtgaggcg
gcaatcgagccagctgtggatcagctctacaagaaggccaagctgaagctggaaaaaatt
caggaatacgagactgctctgttgtgtgaagacgacaaaggagtgcctgacctgtcgctg
tacctcccgtacctggagtgggagcaatcgcaaggtgaccccgcccgaatccagtgcctg
tatgagcgtgctctggcacagcactgcctggtggctgacctctgggaacggtacatggct
tatctggacaaccagctgaaggtggaatctgtgtccctgccttgccatgaacggtctgtg
cgcaactgtccgtggtctgccaacctctgggcctcctacctgaaggcactcgagcgctcc
cgtgcggaacacagcaaagtcaaagagaccatggaacaagcgttgcaggctggattcagc
caaggccaggactatcagcgcctgtggctggcttttctcgactacctacgaagacgcatc
gaagcacactcggtgcaaggtgatgaactgctggccccttacgtggaagacctgcgagct
gccttccaaaaagcagttgaacaccttttgcagtatgcggcaacagagggtgatgtatgt
ggccctgtgctcaagtattgggcaaaagtagaggccaaggtttgccacaatcttccccga
gctcgtgagctctggaacgacatcaccaaccagggacgtgccactgatgcccagacatgg
cttgattatgcaaattttgaaaggacttttggggacgacaaacactaccggaaggttctg
ttccgaggcatgtatgccgctgttgactggcctgaaaccctcggagatctactgctgctc
ttcgagcgcgaggaaggaaccttggaaaccttggacacggcaacagaaaagtatgatgcc
cacatgcggagggtgctcgacaagcgagaaaaagcagctgcacgagaggcagctcgggaa
gccgagcaggaggcacagaagaaaatccaccgagccgagaaaaaggccgagaagaaagcc
gaacggcatgccgagaggcggcgagaagccgaggccaaggttttccagagagagacacct
ggccaagcaaagcggaaagcacagccaccagagccccctgatgctcaggagcaggcaacg
gataaagatggcttcaaagtgccatcagtacctgctgccaaagccacagctgtagaggga
ccaccttctaagaaacaaaaaaccgagggagaggaacagggtgaggagaaaaaggagaag
cccaagcacggcgaggtcgtcaagccagatccactcaaggagattcgcacggttttcctc
agtaacctggcgtacgacgtggaggaatcacagatcgaggaagccttcaaagaggttggc
gaaatagaagaactgcgactcgttcgtgactacaagggcaggtcaaagggattcggctac
ctggtcttcacccacatgcaaagtgtggagggggctctgaagagggaccggactccagtg
aatggccggcctgtctttgtgtccaagtgcaacgaacgaaaccagtttaggtttcgaaca
ggaatggagaagaacaagctttttgtcaagaacattcctttctcggtaacagagaaggag
ttagaggagctcttcggaaagtatggtgaactgaaaggtgttcggctagtcacataccgc
aatggtcactcgaaaggaatagcatacgtggaatacgccaatgagacatccgccacggtg
gcactagtgcagacagacggcatgaccatgggcaaccaggcacttcaggtggccatcagc
aaccccccggctcgcggatatcggcagcagggaaaggaggacggggccgaggatggacag
cagaaagctcagtatccccttgcatcccaggtcgcatcgttgggcggtggaccgaaggag
actggcctgagaggtcgtggacgcactcaggtttccctgatgcccagagcgttgcagcaa
cgttcgtctaccgcagtggtgaagaaaccagaaccaaagcgagagcagcaagagcagccc
atggaagtgtcaggctcgtcttcggaaggcagtaaaggcctcagcaatgatgacttccgt
agcatgctcctcaagaagtga
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