Rhipicephalus microplus (southern cattle tick): 119171580
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Entry
119171580 CDS
T07403
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119171580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmp02000
]
119171580
Transporters [BR:
rmp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119171580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_29
RsgA_GTPase
AAA_16
IstB_IS21
Rad17
AAA_30
AAA_22
AAA_14
AAA_19
nSTAND3
cobW
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
119171580
NCBI-ProteinID:
XP_037278254
LinkDB
All DBs
Position
6:18951562..18985824
Genome browser
AA seq
1718 aa
AA seq
DB search
MPSIFQGHLLQAVCWQDTVVPHVTGEGRSRRRLQQGISMGVVNQLYTIVWKDVYVQAIKR
HYYVTALEVVLIILSFFAVEHDRPILPTKHCDKPPCLHYSEPREYHERDLVNFSCPQLVL
YAPRKIGDKLFHAAFKDNKKVRVVGFETAGHMLSAFHKVSPKPNRGPEQRVVAVTLDQSG
EAGSKLGLAFSVSFYDEFEFMSKRLNGYALFEPLPNPVTQRESVACLQLALGQAHLASVA
AETTYAEKPYNIVTHRTTEGPYPLDMPSHRWLMLIRLGVGYLVPFCLILSRVVEETQQGM
REKLRLVGLRAPVYRLGHWMAGFFSGLVSVVMVMAYMTAVENTGDNGSQASLDDTSKPVV
LICFALFTAQYISKAMLIALFFRDTVLGVVFAVVYWHISYVMPCILLEDMQGRAAHYILL
DRWTKLLTSTLPCVGMHWCFRIIGCANVVGEQYAFTSTTSSVLELDNVTMVEIWSVMLID
SIVNIILGWYLSHVLTWYIGVPYVPWFPLTYQYWFATPKGKFQPIQPSIPDGVHFETYPV
DKEEAVFVNKLEYEKKQKHVLRDTSFKAYQGEIMVILGPSGAGKTALVNIISGSAVATQG
QVIVNGYDVAVQTARARQTMGVVQQRDVLFYDLTVAEHLVFFGALAGLSGEALLRRCVEL
QDMFSLVDIAEVRTNLLAEAQKRRLAIAIAIVVPRKVLILDEPVRGMDAASRMNVWQVLD
KLRPTTCIIITTPEVEAVEVIADRIAVLGYGALKCCGRTGFLQRRYGTGYNVTIQKGPKF
ETKRTLQALQVNVVTMQDVFTRLILELDAANVESRRRAASLARRSSLKSHTGAATEFEYS
QRDIIPTENLGGVSEVEEYESSVQIEQHLKSIFDLKASTPTFVQTLAAMIEKRRNYTWQT
FALPVLCWLLPAALMFVECQSEKRLGNQLAVSFAGDRMTYDLPLLHPGSTVFVSADKASE
PFKREYRRYLDRQDTEVKDVPNVQGLMMEFKKSRTAFREYMAGAEFQAGPDNNTAGKAVA
WYNGDSYHTQSASLAAVGTALLRKISGDDDAMMVTVLRPLRTDNDTVASHSAQNLRYADE
LSALLSSRVLRMVLLPATTSVVAASFVLFPIEDRVTNSKTMQLVSGVHPFIYWLGNYVWD
MVLSLGALLVLFIPMFICHSEFMSIAITMVMVFLSYVHSILALTYWFSFVTDSVISGFLI
VNAINALSGTVSTMGYQLVMIAQEQGSKHLISLTQPWDPLLMALYLLPPFSYTWAITKVA
QKVSEDRYCQGTTQMVHDVCAYLHNSPDEGAVLLTNLQYCCATFYASNGKTVSHLSPFAF
HRDAVLVELLVMLVEGFLLLVLLGLLEHGMLRWFRSGSQTPAAPAQGLREGVAEERKVVE
KIVAGNDFTKPRLVILDIRQNTNNRQVLRGLTFHVDPGETFVVLGLRGCGKTTLLDILSG
VLPPTSGTALIGHTLLSNTSAWQQRIGVCPHYDGVLGRLTVRQTLTLYARVRGMTGDTIN
KMLEHMISLLNLGAVVDNTVDSTSAVTRRKLAVAIAIVGLPPVVLMNDPATGLDTISKRK
IYRSIQILKQLVKSAILIVTQSVSDCVVISDRMAIMLNGQFQCLGSIGDLRKRYCKGSMI
LVKLKPSVFQNTAIISTIHAQVQAAFPGSVYMGRLSMALEYSTELKMPWSTAVVTAHNLK
QQLSDSAIDVILSDVSMEHVLLKMAKYEDVKPVVVAVA
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcatcttccagggacacctactgcaggcggtatgctggcaagatactgtcgtg
ccacacgtcaccggcgagggtcgttccagacgcaggttgcagcaggggatcagcatgggc
gtggttaatcagctgtacacgatcgtgtggaaggacgtgtacgtgcaggcgatcaagcgc
cactactacgtgaccgccctcgaggtggtcctcatcatcctctcgttcttcgccgtcgag
cacgaccggcccatactgccgaccaaacactgcgacaagcctccgtgcctgcactactcc
gagccacgcgagtaccacgagcgagaccttgtaaacttcagctgcccgcaattggtactg
tacgcgccacgcaagatcggcgacaagctgttccacgcggccttcaaggacaataaaaag
gtgcgcgtggtgggcttcgaaacggcgggccacatgctgagcgccttccacaaggtgtcg
ccgaagcccaaccgcggacccgagcagcgcgtcgtggccgtcacgctcgatcagagtggc
gaggctggctccaagctcgggctcgctttcagcgtcagcttctacgacgagttcgagttc
atgtcgaagcggctcaacgggtacgcgctgttcgagccgctgcccaacccggtgacgcag
cgcgagagtgtcgcttgcctacagctcgctctgggccaggcgcacctcgcatctgtggcc
gccgaaacgacgtacgccgagaagccgtacaacatagtgacgcaccgaaccaccgagggt
ccttacccgctcgacatgccttcgcaccggtggctgatgctgatccggctgggcgtcggc
tacttggtgcctttctgcttgattctgtcacgcgtggtggaggagacgcagcagggaatg
cgcgagaagctgcgcttggtcggcctccgtgcccccgtatatcgcctgggtcattggatg
gccggcttcttctctggcctcgtgagcgtcgtcatggtcatggcgtacatgactgccgta
gagaacaccggtgataacggctcgcaggcttccctggacgacacaagcaagccggtggtt
ctcatctgcttcgccctcttcacggctcaatacatttcgaaggcgatgcttatcgcgctc
ttctttagagacacagtactgggcgtggtgttcgccgtggtgtactggcacatcagctac
gtcatgccatgcatacttctagaagatatgcaaggtcgcgcggcccactatattctcttg
gatcgctggacaaagctcctcacctcaacgctgccatgcgttggcatgcactggtgcttc
cgcatcataggctgtgctaacgttgtcggggagcagtatgcattcacctctactacatct
tctgtactggaactggacaacgtcacgatggtcgagatctggagtgtcatgctgattgac
agcatcgtcaacatcatcctgggctggtacctcagccacgttctcacctggtacattggc
gtgccgtacgtgccctggttccctctcacgtaccaatactggttcgccacaccgaagggc
aagttccagccgattcagccatccattcccgatggagtgcacttcgagacgtatccagtg
gacaaggaagaggccgtctttgtcaacaagctggaatatgagaagaagcaaaagcacgtt
ctgcgagacacgagcttcaaggcgtaccagggggaaatcatggtcattttgggccccagc
ggtgccggaaagacagcgctggtgaatataatcagcgggagtgcggtggctacccagggt
caggttatcgtgaacggctacgacgtggccgtgcagactgcgcgcgcacgccagacgatg
ggcgtagtgcagcagcgtgacgtgctcttctacgacctgaccgtggccgagcacttggtt
ttcttcggtgcactggcgggactctccggcgaggccctgctacgccgctgcgtcgagctt
caagacatgttctcgctggtcgacatcgccgaagtgcgaaccaacctacttgcggaggcc
cagaaacgacgcttggccatcgccatagccatagtggtcccacgcaaggttctgattctg
gacgagcctgtgcgtggcatggatgcggcctcgcgcatgaacgtgtggcaggtgctggac
aagctgaggccaacaacgtgcatcatcatcacaacgcccgaggtcgaggctgtcgaagtg
atcgccgaccgcatcgccgtcctgggctacggggctctcaagtgctgcggccgcactggg
ttcctgcaacggcgctatggcaccggatacaacgttaccattcaaaagggccccaagttc
gaaacaaagcgtaccttacaggcccttcaggtgaacgtggtcaccatgcaggacgttttc
actcggttgattctggagctggacgcggcgaacgtcgagtctaggcgccgcgcagcgtcc
ttggcgcggcgcagctctctgaagtcacacacgggcgcagccaccgagttcgagtactcg
caacgagacatcatccccaccgaaaacctgggcggcgtgtccgaagtcgaggagtacgag
tcgtcggtgcagatcgagcagcacttgaaaagcatcttcgacctgaaggccagcacgccg
acgttcgtgcagacgctggccgccatgatcgagaagcgtcgcaactacacgtggcagacg
ttcgcgttgcccgtcctttgctggctgctgccggccgccctcatgttcgtcgagtgtcag
tcggagaaacgcctcggcaaccagctggcggtcagttttgcgggcgaccggatgacgtac
gacttgcccttgctgcacccgggatccactgtgttcgtctcggccgacaaagcgtctgag
cctttcaagcgagaatatcggcggtacctggacaggcaggacacagaggtcaaggacgtc
cccaacgtgcaaggtctcatgatggagttcaagaagtcgcgcaccgccttccgcgagtac
atggccggcgccgagttccaggcgggccctgacaacaacacggcgggcaaggctgttgcg
tggtacaacggcgactcctaccacacacagtcggcgtccctggcggccgtcggcactgcg
cttctcaggaagatctcgggtgacgacgacgccatgatggtgaccgttctgcggcctctc
aggacggacaacgacacggtcgcttcacacagcgcgcaaaaccttcgctacgccgacgag
ctgtcggccctgctgtcctcgcgcgtgcttcgcatggtcctgctgccggccacaacttcg
gtggtggcggccagcttcgtccttttcccgatcgaagaccgcgtcaccaattccaagaca
atgcaactagtctcaggcgtgcacccgttcatctactggctgggcaactacgtctgggac
atggtgctctccctaggggcgctcctcgtgcttttcattcccatgttcatctgccactcg
gaattcatgagcatcgcgataaccatggtaatggtgtttctcagctacgtccacagcata
ctggcgctcacctactggttctccttcgtcactgactccgtgatcagcggctttctgatt
gtgaatgcaatcaatgccctctcaggaaccgtgagcaccatgggctaccagttggtgatg
atcgcgcaagaacaaggttccaagcacttgatctcgctcacccagccatgggacccactt
ttgatggccctgtacctactgcctccattctcctacacctgggccatcaccaaggttgca
caaaaggtgagcgaagatcgctactgccagggcacgacgcagatggtgcacgacgtgtgc
gcctacctgcacaacagccccgacgaaggcgccgtgcttctgacgaatctgcaatactgc
tgcgctaccttctacgccagcaacggaaagacagtcagccacctcagcccatttgcattt
cacagggacgccgttctcgtcgagctcctcgtcatgctcgtggaaggctttctgctgctg
gtgttgcttggcttgttggagcacggcatgctgcggtggttccgatcgggttcccaaaca
ccggcagcaccggctcagggtttgcgcgagggagtggccgaggagaggaaggtcgtggag
aagatagtcgccggcaatgacttcacgaaaccgaggctcgttatactcgacattcgccag
aacaccaacaaccggcaggtacttcgagggttgacgttccacgtggatcctggcgagacg
ttcgtcgtgctcggtctgcgaggctgcggcaagacgacgctcctggacatcctgtccggc
gtgctgccgcccacatcgggcaccgcgctgattggccatacgctgctcagcaacacgtcc
gcctggcagcagcgcatcggcgtctgtcctcactacgacggagtgctcggtcggctgacg
gtgcgccagacgctgacgctgtacgcccgcgtgcgtggcatgacgggcgacaccatcaac
aagatgctcgagcacatgatctcgctgctcaaccttggcgccgttgtcgacaataccgta
gactcgacaagcgcagtgactcgccgcaaacttgctgtggccatagccatcgtcggcctt
cctccagtcgtgctcatgaatgatcctgccacgggactcgacacgatatccaagcgaaag
atctaccgttccatacagatcttgaagcagctggtcaagtcggcaatcttgattgtgacg
caaagtgtgtcggactgcgtggtcatctcggaccgcatggccattatgctgaatggccag
ttccagtgcttaggcagcatcggtgatctccgcaagcggtactgcaaaggctctatgatc
ctcgtcaagctgaagccatcggtgttccaaaataccgctatcattagcaccatacacgca
caggtgcaggcagcatttcctggttcggtgtatatgggtcgtctgtcaatggcactggag
tactccaccgagttgaagatgccgtggagcaccgccgtggtaaccgcccacaacctgaag
cagcaactaagcgacagcgcgatcgacgtcatcttgagtgacgtctctatggagcacgtg
cttctcaagatggccaagtacgaggacgtcaaaccggtggtcgtcgccgtcgcgtga
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integrated database retrieval system
