Rhipicephalus microplus (southern cattle tick): 119171618
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Entry
119171618 CDS
T07403
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmp03036
]
119171618
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rmp04812
]
119171618
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119171618
Cytoskeleton proteins [BR:
rmp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
119171618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
RTP1_C1
HEAT_ECM29
Ipi1_N
TIP120
Motif
Other DBs
NCBI-GeneID:
119171618
NCBI-ProteinID:
XP_037278290
LinkDB
All DBs
Position
6:2859891..3138889
Genome browser
AA seq
1330 aa
AA seq
DB search
MALVVGLEQFVPQLSSQDTKKRLQLGATLLSYLDDPLNLVDCTEMGAVIDGLVAWLNSSN
SKVAQNGLEILSILAERLKEDFRPYISTVIPATMDRMGDSKDSVREQAKYFTMTLMKVSS
PQYILEKMMPAFSHKNFRIREEVLLCLQDTLNAYGPQNLSLMKFMPLIAKLLGDPNSQVR
ETAFQTFVIIYTHVGERVRMDLGKKYGIPPAKLQALFDKFDEVKRSGQLLHTATLDLAHR
GDDELDRAVHSNINDAEASLGKASKRASSAPPNRRAVLATPIKPAQQPSTATTPATLTRK
HSLKGPPPVKAAVSANAGAVDEEMFIRSFEDVPKTQLYSAKELEQELAKIKQVLNDTNAD
WEKRVDMLRHLRSLLLAGAADYEELFASLRLLEPSFQVLVRDLRSQVVREACITIAYLSQ
QLGHKLDHFSEAVLPALINLIPNSAKIMSTSGIVTVRFIIQHTHVSRLIPVITMNLSSKS
KDIRRSCFEFLDQLLHTWPTHTLERHIAILQEAIRKGISDADPEARAFSRKAFWGFADHF
KEQADVLLNSLDSGKQRMLQGELCMSNSSSSNSLNSAQGRPLKHSVSSHGSMENLRPGSG
SATLGRTRSGVPVYNNTRSASVRSNSAIDLGAARRARARAFTTAQNRGTGASLPRPGTKR
ADTVSSTMASPERISRSRTKGVSQSQPSSRSGSPTSRLSYATYSHTDGTGRVRRKSGIPT
PVGTSREASPTRPTAATPSMTGMYERRLSGSTRRPFGGACDRYNPQTTTTTPLMAQQILQ
QSKEAEAAVADALECWNTPPRKNRYNAFDDQSDESETSSVCSDRSFSSYNRGGYEGHIPV
QDVPTILKHLSSIHWSDRKEGLLGLLSVLRSGRTLSLPDLKKVTDMFTKMFMDPHTKVFT
LFLEALGELIHVHSADLHSWLYVLLTRLFIKTGTDLLSSLQMKIQKILSIIRDCFPHGDQ
FQAVVRYITDPTQTPNIKVKITILRYLMTLLHAMDSGDLLVNTPETHSMVAKIFAWIRDQ
KSPELKRHAQEVIVSIFKLRPGEINGLLSRLDPDNQALAMALIQSYMRGRSDDSELRTPS
PITTHVPISSTPNRGSRSRSSTPLQRSLEEEEDNTENLNPDELYSSLLRRTTAQIHRLAL
DPVRGTDLTDSTLTPTSRGAELLLPPLGGGSFRQRLAPQNWEESCTFTQQRLTGSREASP
VKRMASWDYDGETGMHRIRRTSLDGGVAKSEQDTLNNIFAILQNPNSRTEHRKQALSELV
PLTKDGSPELWDENFRNVLRCLVENLEEQVVPVKVAALRALAELLKRQPQHFHNYAELTL
IKIFGTFKQS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcactggtcgtgggcctggagcagtttgtgccccagctaagcagccaggacaccaag
aagcggctgcagctgggcgccactctgctttcttacctggacgacccactgaatcttgtg
gactgcacagaaatgggcgctgtcattgatggtctggttgcctggttgaacagcagcaac
tcaaaggtggcacaaaatggtctcgagatcctttcaatcctggcggaaagactcaaggag
gacttccggccatacatctccacagtcattccggcaaccatggacagaatgggtgacagc
aaagattctgtgcgggagcaggcaaagtacttcactatgacactaatgaaggtgtcatct
cctcagtacatccttgagaagatgatgccagcgttcagccacaaaaattttcgaatacgt
gaagaagtgttattgtgcctccaggacactttaaatgcgtatggcccccagaacctgtct
ttgatgaagttcatgccactaattgccaagctacttggagaccccaattcacaggtgcgt
gagacggcgtttcagacgttcgtaatcatctacactcacgttggcgagcgggtgcgaatg
gacctgggaaagaagtatggcattccacctgccaagctgcaagcactgttcgacaagttt
gacgaagtgaagagatctgggcagcttctacatactgcaacccttgacctcgctcacaga
ggtgacgatgagcttgacagggcagtgcattccaacatcaatgatgcggaagcgagttta
gggaaggcttcgaaaagggccagcagcgcacctccgaaccgacgggcagtgttggcaaca
cccatcaagcctgcacagcagccctcaacagccacaactcctgccacactcaccagaaag
catagcttgaaaggccctcctcctgttaaggccgctgtttcagcgaatgcaggagctgta
gatgaagagatgtttatccgatcatttgaagatgttccgaaaacacagctttactcggca
aaggaactggaacaagaacttgcgaagatcaagcaggttctgaatgatacaaatgctgac
tgggagaagagagtggacatgctgcggcaccttcgcagcttacttctagcaggtgctgca
gactatgaggagctgtttgccagtttgaggctcctggagccttcattccaagttctggtt
agggacttacggtcacaagtggtcagggaagcctgcatcactattgcttatttatctcaa
caattgggtcataaacttgaccacttctcggaagcagtacttccagcgctcataaactta
atccccaatagtgccaagattatgtccacatccggcattgtcacagtgaggttcatcatt
cagcacactcatgttagtcggttgataccagtgattacaatgaacttaagttcaaagtcc
aaggacattagaaggtcgtgctttgagttcctcgaccagttgctgcacacatggccaaca
cacaccctggaaaggcacattgctatcctgcaggaggccatcaggaaggggatcagcgat
gccgacccggaagcccgtgccttttcacgcaaggccttttggggctttgcggaccatttc
aaggagcaggcagatgtgctgctcaactcgctggacagtggcaagcagcgcatgttacag
ggtgaactgtgcatgagcaactcctcaagcagcaactcgctcaacagtgcacaaggccgg
cccctgaagcactcggtgtccagccatggatccatggagaatctgaggcctggtagtgga
agcgcaactctgggacggacgaggtctggtgtgccagtctacaacaacaccaggagtgcc
tctgttcgatccaatagcgccattgatttgggggcagcgagaagggcacgagcacgtgcc
ttcaccacagcacaaaacagaggcacaggagcatcgctgcctcgtccaggaacaaaacga
gctgacactgtgtcaagcacaatggcatcgcctgaacgaattagtcgaagtcggacgaag
ggtgtttcccagtcacagccaagcagcaggtctggatcccccacatctcggctgagctac
gctacctactcacacacggatggtacgggacgggttcgccgaaaatctggcattcccacg
ccggtgggcacaagccgtgaggcaagcccgacaagacccactgcagccaccccgtctatg
accggaatgtacgagcgtcgtctcagtggaagtacaaggcgcccttttggtggtgcctgc
gaccggtacaacccccaaacaacaaccacaactccactgatggctcagcagatactgcaa
cagagtaaagaggccgaggctgctgtggcagacgcattggaatgttggaacactcctccg
aggaagaaccgatacaatgccttcgacgatcagtcggatgagagcgaaacgtctagtgtc
tgctcagaccgctcgttcagttcctacaacagaggtggttatgagggccacatcccagtg
caagatgtgccaaccatcttgaagcatctgtccagcatccactggtcagaccgcaaagag
ggcttgctgggcctgctgtcagtgctgcggtcggggcgcaccctctctctgcctgacctc
aagaaggtcaccgacatgtttaccaagatgttcatggacccccacaccaaggtgttcaca
ctcttcttggaggccttgggggagctgattcacgtccacagtgcagacttgcacagctgg
ttgtacgttctccttacccgtctcttcatcaagacgggaacggaccttttaagctcgcta
caaatgaagattcagaagatcctgtctataattcgggactgttttccacatggtgatcaa
tttcaggcggtggtgaggtacatcactgatccaacgcagactcccaatatcaaggtcaaa
atcacaatactgcggtatctgatgactctgctccatgcgatggattctggggacttgctg
gtcaacactccagagacacactctatggttgccaagatatttgcctggatacgtgatcag
aaaagtcctgaacttaagaggcacgcccaggaagttattgtgtccatattcaagctgagg
ccaggagaaattaatggattactgagcagacttgaccctgacaatcaggctctggccatg
gccctcatccagtcgtacatgcgtggtcgttctgatgacagtgagctgcgaacacctagc
cccatcacaacacatgtccccatcagcagtacgccaaacagaggcagcaggagccgatca
agcacgccgctgcagcgttctctggaagaagaggaggacaacaccgagaacctgaaccca
gatgagctgtacagctcactgctgcgccgcaccacggcccagatccaccggctggcattg
gacccagtccggggtacggacttgacggactccaccctgacgcccacctcccgaggcgcg
gagctgctgctgcccccgttgggaggaggcagcttccggcagcggctggcaccccagaac
tgggaggagtcgtgcaccttcacgcagcagcggctgaccggcagccgggaggcctcgccc
gtgaagcgcatggccagctgggattatgatggtgaaaccggtatgcatcggatccggcga
acgtcactcgatggtggtgttgcaaaaagtgaacaagacaccctaaataacatttttgcc
atcctgcaaaacccaaacagcaggacagagcatcgcaagcaggccctgtctgaactcgtg
ccgctcactaaggatggctcaccggagctgtgggacgagaatttcaggaacgtactaagg
tgccttgtggaaaaccttgaagaacaagtggtgcctgtaaaagtggctgccctcagagcc
ctggctgaactgttgaagaggcaaccacaacacttccacaattatgctgagctgaccttg
attaagatcttcggaacgttcaaacagtcctga
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