KEGG   Rhipicephalus microplus (southern cattle tick): 119171656
Entry
119171656         CDS       T07403                                 
Name
(RefSeq) uncharacterized protein LOC119171656
  KO
K12602  WD repeat-containing protein 61
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119171656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmp03019]
    119171656
Messenger RNA biogenesis [BR:rmp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     119171656
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_VPS8 Beta-prop_ACSF4 DSE1_N Beta-prop_WDR75_1st Beta-prop_Aladin CFAP251_N Beta-prop_RIG_2nd Beta-prop_WDR41 Tricorn_2nd Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SCAP NBCH_WD40 WD40_RFWD3 Cytochrom_D1 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N PD40 Beta-prop_HPS5 PROPPIN ASA1 WD40_like eIF2A Beta-prop_DCAF12 WDR54 PAC11 DUF7165 PALB2_WD40 Beta-prop_pof12 PHTB1_N
Other DBs
NCBI-GeneID: 119171656
NCBI-ProteinID: XP_037278342
LinkDB
Position
4:complement(19301881..19325076)
AA seq 302 aa
MYSVFMKQDLAHDDAIWSCAWAKSPKDGSDLILTGSVDDTVKCWKCDDEKLVLQHIFEGH
ALGVFSVDVSHDGKVAASSSLDSNIKLWDLETGEEKKNIDAGPVDAWSVTFSPDSRFLAS
GSHSGKINLYGIESCKLESSLDTTGKFTLSIAFSPDGKYIASGAIDGIINVFDISTGKLV
HTLEGHAMPIRSLTFSPDSQMLVTASDDCHIKVYDVQHAGLVTTLSGHGSWVLHVTFCSD
NTHFASSSSDRTVKVWDLPAKECVHTFSEHTDQVWCTKYNTMGNRLVSVSEDKSIYIYDC
PL
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtattctgtgtttatgaagcaagatctggctcacgatgatgcaatctggagctgcgct
tgggcgaagtcaccaaaagatgggagtgacctcattttgactggttccgttgatgacact
gtgaagtgctggaagtgtgatgacgagaaactggtacttcagcacatttttgagggccat
gctctcggggttttctctgttgatgtgtctcacgacggcaaagtggctgcatcaagctcc
ttagatagcaacataaagctgtgggatttagagactggcgaggagaaaaaaaacattgat
gcaggtccagttgatgcttggtctgtaacattctcacccgactcacggtttctggcgtct
ggctcccattcgggcaagataaacctctatggcatcgagtcctgcaagttagaatcatcg
cttgacaccacggggaagttcacactcagcatagcttttagtccagatggaaagtacatt
gcaagcggtgccattgatggcatcatcaatgtgtttgacatttccacaggaaaactggtg
cacacactcgaaggtcatgccatgcctatcaggtcattaacattctcgccagactctcag
atgctagttactgcttctgatgattgccacatcaaggtttatgacgtccaacatgctggt
cttgtgaccacgctttctggccatggctcctgggtgctgcatgtgaccttctgctctgac
aacactcactttgcatcgagttcgtcagatcggactgtgaaagtatgggacctgccggca
aaggagtgcgtccacacattcagtgagcacactgatcaggtctggtgcaccaagtacaac
accatggggaaccgcttggtctcagtttccgaagacaagagcatctatatctatgactgt
cctctgtaa

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