Rhipicephalus microplus (southern cattle tick): 119171732
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Entry
119171732 CDS
T07403
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04140
Autophagy - animal
rmp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119171732
04148 Efferocytosis
119171732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119171732
Membrane trafficking [BR:
rmp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119171732
Hops complex
119171732
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
119171732
NCBI-ProteinID:
XP_037278450
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All DBs
Position
6:14359262..14390354
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AA seq
840 aa
AA seq
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MALHTADWSPLGKDVYYRKFELYSMDWQAQNFDLSDFIVASAPYGGPIALIRDDRKATRI
KLGSGCLIHLFSASGKTLGNIKHDAGAIVASGLVQRGKPCCHTEDGTITEYSLQGRLQKT
FTMGQIPKDTGVLEARVFSTNKRTGVIILTGSYKFFLVENIASYKTWQLGDVPDMDAPPS
SWTAVFDDTSTKVVVAKDDKIYVLDPRSNTRCSLETPHFTYPFNSIIEMAVSFDYKNIAL
FLDNGLLWAGSSDLKTVYCEIDTRAKSRPKQLLWCGRRAVVGHWNNLVFVVGMDRDFINY
TFDTSIFLVQELDGTRIIGNISHELLQKVPEVVTDVFRIGSIKPGALLVEASVEFEKKSY
RADEYLRTIMENNELELAVQQCIDAAAHEYQPKTQKKLLRAAFFGKSFVQGMNPSSFVEI
CRLLRVLNAVRDHMVGLPLTYTQLQCLSIDVLLDRLVLRQHYYLALKIAKYLRIPDLEGT
SRILAHWACYKVAQLHIPTDEVAKAISEKLDSSPGILYSEIARKAVDCGRQDLAIKLLDC
EPRASEQVPILVELGQEERALVKAIESGDTDLVYMVMLKLKEMKPTQLDMIIRAYPVAWS
LYLKVCKEWDLQKLESLHDQEDNFAGIAECKIIESYKLTRPEQRIACLQAAAAKYKQGSK
KGSNDFCAVQTEDQMRLMRYQLKLEDKFHDKFLDLSVHETMQRLMEIGEMKLAEELCKDF
KVPEKRFWWLKIKVLAEKEHWMELEKFSKSKKSPIGYEPFVDICLEHRNKFEAQKYMAKV
KEENKVRYLVKIGNLEEAAKVAFEQKDEGALNFILSKCTAANRAVGDKIATMKQQLAGKR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcacacagctgattggagtccgctaggaaaagatgtttactacaggaagttc
gagctttattctatggactggcaggcgcaaaattttgacctgtcagatttcatcgttgct
tcagctccatatggaggaccgattgccctcatcagagatgaccgtaaggccacccggata
aagctaggcagtggatgcttaatacacctcttttctgcaagtggaaagacactaggaaat
ataaagcatgatgctggggctatcgtggccagtgggttggtccaacgtggaaagccttgt
tgtcatacagaggatggcaccataactgagtactcacttcaagggagattgcagaaaaca
ttcaccatggggcagattcctaaagacacgggtgtactcgaagctcgagtgttttccaca
aacaaaaggactggagtgattattctcacggggtcctacaagttctttcttgtagaaaac
attgctagctacaaaacctggcagctgggagatgtgccggacatggatgctccgcccagt
agctggactgcagtcttcgatgacactagtaccaaagtcgtcgttgccaaagatgacaaa
atttatgtgctggaccccaggagtaacacaagatgttctttagagacaccacacttcacg
tatccattcaattccatcattgaaatggccgtgtcgtttgactacaagaacattgccctt
tttctcgacaatggcctcctctgggcaggttccagtgatctaaagacagtgtactgcgag
attgacacacgggcaaagtctcgacccaaacagctgttgtggtgtggccgccgagctgtt
gtagggcactggaacaacctcgtctttgttgtcggcatggacagagacttcatcaattat
acttttgatacctcaatattcttagtccaggaactagatggcactcgcatcattggcaac
atcagtcacgaactgttgcaaaaggtgccagaggtagtgacagatgtcttcagaatcggc
tcaataaagcctggtgctctccttgttgaggcttctgtggaattcgagaaaaaaagctac
agagcagacgagtacctgaggacgatcatggagaacaatgaactggagcttgctgtacag
cagtgcatcgatgctgctgcacacgagtaccagcctaaaactcagaagaagctgctgagg
gccgctttcttcggaaagtcatttgtgcagggcatgaatccaagtagcttcgttgaaatc
tgtcgtctgctgcgagttctgaacgctgtgagagaccacatggtggggttgcctttgacc
tacacgcagctccagtgcctctcgatcgatgtcctgctagaccggttagtattgcggcag
cactactatcttgcactcaagattgcaaagtacctgcgcatcccggacctagagggcacc
agtcgcattttggcacattgggcctgctataaggtagctcaactgcacattccaacagat
gaagtagctaaagccatttcagaaaagttggattcctcgcctggaattctttactccgag
attgccagaaaagcagtagattgtgggaggcaggacttggcgatcaagcttcttgactgc
gagccaagggcatctgagcaggtgcccattctcgtggaacttggccaagaggaaagagct
ctggtcaaagctatcgaaagcggtgacacagacttggtgtacatggtgatgctgaagttg
aaagagatgaaacctacacagctcgacatgataattcgagcatatcctgtggcatggtct
ctctatctgaaggtatgcaaagaatgggacctacaaaagttggaaagtctgcatgatcaa
gaagacaactttgctggaattgcagagtgcaaaatcatcgaaagctacaaattaacgcgt
cctgagcaacgaatcgcttgtttgcaagccgctgctgccaaatacaagcaagggagcaag
aaagggagcaatgacttctgcgctgtgcaaacagaagaccagatgaggttgatgaggtac
cagcttaaactggaggacaagttccacgacaagttcctcgacctgtcagtgcacgagacg
atgcaacggctcatggaaatcggggagatgaagttggctgaggaactctgcaaggacttc
aaggtgcccgagaaaagattctggtggcttaaaataaaggtgttggcagagaaggagcat
tggatggaactagaaaagttctccaaatcgaagaagtcgcccatcggatatgagcctttt
gtcgatatttgcttggagcacagaaacaaatttgaagcacagaagtacatggcaaaagtg
aaagaggaaaacaaagtcagataccttgtgaagattggcaatttggaggaggcagcaaaa
gttgcctttgagcagaaggacgagggtgccttgaactttatcctatcaaagtgcacagca
gccaaccgcgcagtcggtgacaaaattgccactatgaaacagcaactggctggcaagcga
tag
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