KEGG   Rhipicephalus microplus (southern cattle tick): 119171783
Entry
119171783         CDS       T07403                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmp03041]
    119171783
Spliceosome [BR:rmp03041]
 Complex B
  Other components
   Complex B specific factors
    119171783
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_EIPR1 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N PROPPIN DUF7165 Beta-prop_IP5PC_F VPS8_N Beta-prop_LRRK2 DUF7899 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 119171783
NCBI-ProteinID: XP_037278516
LinkDB
Position
6:19078363..19089929
AA seq 521 aa
MAIEIESADVVRLIQQYLKESNLFRTLQVLQEETSISLNTVDSVDSFVQDIHSGHWDTVL
KVVQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIKLKQEEPERYIHLENQ
LARSYFDPQEAYPSGSSKERRRTAIAQALSGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTTLDLFRGRAAHRGGQQEEERFPTQLSRMMRFGPKAHVECTRFSPDGQFLVTGSVDGFI
EVWNFTTGKIRRDLKYQAQDNFMMMDDAVICICFSRDSEMLASGAQDGKIKVWKIQTGQC
LRRFERAHSKGVTCLSFSRDSSQLLSASFDQTIRIHGLKSGKLLKEFRGHTSFVNDVIFT
PESHHLLSASSDGTVKLWSVKSTECLSTFKSLGAAGGTASGMGSDITVNSIHALPKNPEH
FVVCNRSNTVSIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDHVLYCFSTV
SGTLDRTLTVHEKDVIGVCHHPHQNLIATYSEDGLLKLWKP
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcgatcgagatcgagtcagcggacgtcgttcgtctcatacagcagtacctgaaggag
agcaacctctttcggacccttcaagtcttacaggaagagacgtccatatccctgaataca
gtagacagtgtcgacagctttgtccaagatatccacagtggtcactgggacaccgttctc
aaggttgtccaatcgctaaagttgccggacaagaagctcatcgatttatatgagcaggtg
gtgttagagctgatcgagctgcgtgaacttggcgcagctcgatctctcttgaggcagacg
gatcccatgatcaagttgaaacaagaagagccagaaagatacattcacctggaaaaccag
ctggcacgctcctatttcgacccgcaagaggcataccccagcggaagcagcaaagaacgg
cggcggacagcgatagcgcaggccctgtcgggagaggtgagcgtggtgcccccctcacgt
ctcctggcattgcttggccaggcgctaaagtggcagcaacaccagggtcttctgccccct
gggacaaccctcgacttgttccgtggcagagccgcccacagaggaggccagcaagaggag
gagcgtttccccacacagctgtcgcgcatgatgcgctttgggcccaaggcacacgtcgag
tgtacccgtttttcgcccgatgggcagtttctggtcaccggctctgtggacgggttcata
gaggtctggaacttcaccaccggcaaaatccgccgggatctcaagtaccaggcacaggac
aatttcatgatgatggatgacgcagttatttgcatctgcttcagcagggattctgaaatg
ctggcatctggtgcacaggatggcaaaataaaggtgtggaagatccagacaggccagtgt
ctgcggcggtttgagcgtgcccactccaagggtgtcacgtgcctcagtttctctcgggac
agcagtcagcttctgagtgcttcttttgatcaaaccatcaggatccacggcctaaagtct
gggaagctgctgaaggagtttcgtggccacacctcgtttgtgaacgacgtcatcttcacg
cccgagagccaccacttactcagtgctagctccgatggcacggtcaaactgtggagtgtc
aagagcaccgagtgcctgagcaccttcaagtccctcggtgcagccgggggcacggctagc
ggcatgggcagtgacatcactgtcaactcaatccatgcactgcccaagaaccccgaacat
tttgttgtctgcaaccgttcaaacacagtctccatcatgaacatgcaaggacagattgtg
cgcagcttctccagtggtaaaagggaaggtggcgacttcgtttgctgcacactgtctcca
aggggagagtggatttactgcgtgggtgaggaccacgtcttgtactgtttctccaccgtc
tctggcacgcttgaccggacgctcacggttcacgaaaaagatgtcattggtgtctgtcat
catcctcaccagaacctcattgctacatacagtgaagatggccttctcaagttatggaaa
ccataa

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