Rhipicephalus microplus (southern cattle tick): 119172005
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Entry
119172005 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119172005
09122 Translation
03013 Nucleocytoplasmic transport
119172005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119172005
03041 Spliceosome [BR:
rmp03041
]
119172005
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119172005
Spliceosome [BR:
rmp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119172005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
119172005
NCBI-ProteinID:
XP_037278850
LinkDB
All DBs
Position
1:complement(117613546..117706857)
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AA seq
674 aa
AA seq
DB search
MSRDKKVKRSKTGNDVSNSGSGPNLHMDYFLMEEEESKTRDPRDDETVFRKICSEIQANM
KKILEMKLQRRPLADIEKLRVXTSLLFLGLKKINRLDKHRLKVAKDAVNEKKQKVDNFHL
QLQNLTYEVMHLQKEVTKCMEFRSRDEEIDLVPVEEFRREAPAEVLKRDLTDADPHQLTL
ARLQWELVQRKELSQKLKGLESLREQYVREIERKRECLSGIQPTLQAVLEAAQPLQADLG
LPLQAHQGEHANAQYLSRPLYVLYVQAAAYQHAYGDCFEIAMEGSVEESKALLETTQEKQ
EEYSGESDQEESNAGKRHRRLTRSGTGLSSLAKCLQKHPLIVVITLQHKGYNLQITFTYI
IALHIVTVTAKVMEPHGVSSGVSASPVMSPSTILDNLFGDDNGLCSPNPGNHFQLKKNGL
EDFSKVVAEVGKAYRWAQRLAGLEFLQGSGSSVVASHEVGRAFVEEFARAIAARFAARVG
LYGQLLSLEKGVVQVPSQLARHFPSKVNSMLKQWTEVTHADVESHPSHKEMEELGLIRGD
ELVYQAVLRRGSATLKALVLLRDNYPKEAPLFLLVLQLREECSSRDDDAVKELERELNLH
CVEQEQVQAGDQLLSCQLQQLLVSMDILLESLCDQLDAPREFSRDKVLARTARGPGRSRP
YKFLPKPGIFMQRT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagacaagaaagtgaagcgttcaaagaccggtaacgatgtctccaactccggt
tcggggccgaatctccacatggactacttcctaatggaggaggaagagtcgaagacacgt
gatccacgagacgatgagactgtcttccggaagatctgcagcgagattcaggcaaacatg
aagaaaatactggaaatgaaactgcagcgcagacccctggctgacattgaaaagcttcga
gtgnagacatccttgctgtttttgggactgaagaaaatcaaccgcctagacaaacatcgg
ctcaaagtggcaaaggatgctgtcaacgagaagaagcagaaagtggacaacttccacctc
caactgcagaacctgacatacgaggtgatgcacctgcaaaaagaggtgaccaagtgcatg
gaattcaggtccagggacgaggagatcgacctggtaccggtggaggagtttcgcagggag
gcaccagctgaggttctcaagagggacctgaccgatgctgacccacaccagctgaccctg
gcaaggcttcaatgggagcttgtacagagaaaagagctgtcccagaagctgaagggcctg
gagtccttgcgtgagcagtacgtgcgcgagatcgagcgcaagcgcgagtgcctgtctggc
atccagccgacactgcaggcagtgctggaggcagcacaacccctgcaggctgaccttggc
ctgcctctgcaagcccatcagggggagcatgctaacgcccagtacctgtcgaggcccctg
tacgtgctgtacgtgcaggccgccgcctaccagcatgcctacggtgattgctttgagatt
gccatggaaggcagcgtggaggaatccaaggcacttcttgagacgacgcaagaaaaacaa
gaagagtacagtggagaatcagaccaagaagaatcaaatgctggaaaacggcataggagg
ctgacccgtagtggaactggtctctccagtctggctaagtgtctgcagaagcacccactc
attgtggtgatcaccttgcagcacaaagggtacaacttgcagatcacatttacgtacatc
attgccctgcacattgtcacagtcacagccaaggtgatggaacctcacggtgtctccagt
ggtgtgtccgcaagcccggtcatgtccccttccacgattctcgataacttgtttggtgat
gacaacggcctctgttctccaaaccccggcaaccatttccagctcaagaaaaatgggttg
gaggacttctccaaggtggtggccgaggtgggcaaggcttaccgctgggcgcagcgcctg
gcgggcctcgagttcctgcagggttccgggtcctccgtggtggcgagccacgaagtaggg
agggcctttgtggaagagttcgcgcgtgccatcgccgcccgttttgcagctcgggtgggc
ctttacgggcagcttctgtccctggaaaagggcgtggtgcaagttccttctcagctggcc
cgtcattttcccagcaaagtgaactcgatgctgaagcagtggacggaggtgacccatgct
gatgtagagagccacccatcgcacaaggagatggaagaactgggcctaatacgaggggat
gagcttgtctaccaggccgtgctacgccggggatctgctacattgaaggcattggtgctg
ctgcgtgacaactacccgaaggaggcacccctctttctgctggtgcttcagctgcgtgag
gagtgctccagccgggatgacgacgccgtcaaggagttggagcgcgaactgaacttgcac
tgcgtagagcaagagcaggtgcaggcaggtgaccagctgctgagctgtcagcttcagcag
ctcctggtctctatggacatcctgctcgagtcactgtgcgaccagctggacgcaccacgc
gagttctctagggacaaggtgcttgcccggacggctaggggtccagggagaagccggccg
tacaagttcctccccaaaccaggaattttcatgcaacgaacataa
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