Rhipicephalus microplus (southern cattle tick): 119172133
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Entry
119172133 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG9-like
KO
K18735
protein SMG9
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119172133
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119172133
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
RsgA_GTPase
NB-ARC
Smg8_Smg9
AAA_30
MMR_HSR1
MeaB
nSTAND3
Motif
Other DBs
NCBI-GeneID:
119172133
NCBI-ProteinID:
XP_037279040
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All DBs
Position
6:complement(63503498..63547625)
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AA seq
450 aa
AA seq
DB search
MIAVTTKSVLTLPSSRSVSRRRTRVSRLNRCSYSPSIRTGALLPRVSRKQVVDATSGESS
KPTVLLSKASSRAESPASSSSTSKDDAPAXSASVATNPSIKQPPPESLSDRLAAPPDMAA
PVKFIDDSLQWCDSALEYLLDQPDFYVVGIIGMQGAGKSTIMSILAGQYGQAGTRQLFRP
QSRELRELGQHCTTGVDIYVTPERMILLDTQPVISASVMDHMIQFEKKTPGGGDFHSLEN
AHVMQSLQMASFLMAICHTVIVVQDWFADPNFLRFVLTAEMLRPTTSSHDQSRSNGEDVA
ESFPHLVFVQNKCTPGDFSPENIAAMSQTLDAIFTKSKLKYKGPGHISMDASVTLGKEKQ
HQGPNLFLLPKKLSEQEEKRRSEGDAAPGYQDGGRLEQLASFLTLQIGCMPKQHITHTPL
TEKNWFHYSARLWDAMQKSMVFMEYSRLLP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggttactacaaaaagcgtccttacgctgccaagttccaggagcgtgagcagg
aggcggactcgagtcagcagattaaaccggtgttcatactcgccaagcatccggaccggg
gcacttcttcccagagtcagtcgcaagcaagtggtagatgccacttccggagagagttca
aagccaaccgttctgctcagcaaagcatcgtcaagggctgaatccccggcgtcatcatct
agcacatctaaagacgatgcccccgccnnatcggcatcggtagccactaacccatccatc
aagcaaccgcctcccgagagcttgagtgaccgactcgcagcgcctcccgacatggctgcc
cctgtcaagtttatcgacgattccttacagtggtgtgacagtgcgctcgagtaccttctg
gaccagccagacttctacgtggttggaattattggcatgcagggcgctggaaagtcaacc
attatgtccatactcgctggtcaatatggccaagcaggcacgaggcagctgtttcgtccg
cagagccgagaattgcgggagctcggccagcattgtacaacaggtgtggacatttacgtc
actccagaaaggatgattctgctcgatactcagccagtcatcagtgcctcggtgatggac
cacatgatccagtttgagaagaagacacccggtgggggagatttccattcactggaaaat
gctcatgtcatgcagtctctgcagatggcctctttccttatggctatctgccacacggtc
atcgtcgtgcaagattggtttgccgacccaaattttctcaggtttgtccttacggctgaa
atgctgaggccgacaacttcctcacacgaccaaagtcgcagcaacggcgaagacgttgct
gaaagcttccctcacttagtgtttgtgcagaacaaatgcactcccggcgacttttctccc
gagaatattgcagccatgagccagacattggatgccatttttaccaagtcgaaattgaag
tacaaaggcccaggacacataagtatggatgcctcggtcacacttggcaaggagaagcaa
caccaaggaccaaatttgttcctgcttcccaagaagctgtctgagcaagaggagaagcgg
aggagcgaaggcgacgctgcgccaggatatcaggatggcggccgactggagcagctagct
tcatttctgaccctccaaataggctgcatgccgaagcagcacatcactcacacgcccctc
acagagaaaaactggttccactactcggcacggttatgggatgctatgcagaagtccatg
gtcttcatggagtacagtcggctgcttccataa
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