Rhipicephalus microplus (southern cattle tick): 119172313
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Entry
119172313 CDS
T07403
Name
(RefSeq) ATP-dependent RNA helicase me31b-like isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119172313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119172313
03036 Chromosome and associated proteins [BR:
rmp03036
]
119172313
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119172313
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119172313
mRNA degradation factors
5'-3' decay
Decapping complex
119172313
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119172313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119172313
NCBI-ProteinID:
XP_037279263
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All DBs
Position
6:complement(93788676..93810225)
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AA seq
442 aa
AA seq
DB search
MTTIVENSGNHSPEKSVIHTNNIRDVDEGGWKSKLVIPPRDLRKRTSDVTDTKGNEFEDF
CLKRELLMGIFEKGWEKPSPIQEASIPIALLGRDILARAKNGTGKTGAYIIPMLQRIDVT
KDHIQAMAIVPTRELALQTSQICIELSKHLKARVMVTTGGTNLKDDIMRIYENVHVIIAT
PGRILDLMEKRVAQMDKCNMLILDEADKLLSQDFKGLLDKVISYLPSDRQILLYSATFPL
TVEQFMKKHLHSPYEINLMDELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITELGYSCYYIHAKMSQQHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFSLHRIEQELGTEIKPIPK
VIDKNLYVAELQLEDAEANASK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccactattgtggaaaactcggggaaccattcccctgagaaatctgtaatccacacc
aacaacattagggatgttgatgaaggtggttggaaatctaaacttgtcatacctccacgt
gatttaaggaagagaacatctgatgtcacagatacgaagggcaatgaatttgaggacttt
tgtctaaagcgagagcttctcatgggcatctttgagaagggttgggagaagccctctcct
attcaggaagccagcattcccatagcgctgctggggcgagacattctggctcgggccaaa
aacggcactggcaagacgggtgcttacatcatccccatgctccaacgaatagacgtcaca
aaggaccacatccaagctatggccattgtcccaactcgagagctcgccctccaaaccagt
caaatttgcatcgagctatcaaaacacctaaaggccagagtcatggttactactggtggc
accaatctgaaggatgacatcatgcgcatctacgagaatgttcacgtgatcatcgcaaca
cctggccgcatcttggatctcatggagaagagagtagcgcagatggacaagtgcaacatg
ctcattctggatgaggccgacaagctgctctcccaggacttcaagggcctgctggacaaa
gtgatcagttacctgccctcggacaggcagattcttctctactctgccactttcccactc
acagtggagcagttcatgaagaagcacttgcacagcccatacgagattaacctgatggac
gagctgaccctgaaaggtgtgacccagtactacgcttttgttcaagaaaggcaaaaggtc
cactgcctcaacacgctcttctcaaagctgcaaatcaatcagtcaatcatcttctgcaac
tccactcagcgggtggagcttttggcgaagaagataacggaacttggctactcgtgctac
tacatccatgccaagatgtcccagcaacatcgtaatcgtgtgttccacgactttcgtgct
ggcctctgcaggaaccttgtctgctctgaccttttcacgcgaggcatagacatccaggct
gtgaacgtggtgatcaactttgacttcccaaagatggcagagacatatctgcaccgtatt
ggccgatccggccgctttggccaccttggcattgccatcaacctgatcacctatgatgac
cgcttctcactgcaccgcattgagcaagagctgggcactgaaatcaagccgattcccaag
gtcatcgacaagaacctctacgtggcagagctgcagctggaagatgcagaagcaaatgcc
agcaaatag
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