Rhipicephalus microplus (southern cattle tick): 119172428
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Entry
119172428 CDS
T07403
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119172428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119172428
Membrane trafficking [BR:
rmp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119172428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
zf_RING_Vps8_fungal
Beta-prop_WDR5
zf-RING_Vps41
zf_RING_Vps8
WDR55
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_WDR3_1st
zf-RING_UBOX
Beta-prop_EML
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119172428
NCBI-ProteinID:
XP_037279427
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All DBs
Position
6:complement(131029950..131034580)
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AA seq
1309 aa
AA seq
DB search
MDDSSDVVDDRLRSDSIATEDAALAFDIEELDDKEFELPPVENPPTLESILNEVDGGSLS
DEEVPNQALFHGNCDSVSLASADSRNLPTDRVSARPSSILRHVILRGVSSQLRSAMERVD
SGKPTAMAVSSLIAVGTFHGLVLVFDPEQALKWCLGSIQLGEQYGSVSAMGFNGDCSRLL
CGYAKGQLTMWDLSNGKLLRTITDIHPPQMAILHVKFTDDPTLAICSDSGGSVYELNFRK
VLNSRTCDSVCIFSGSRGEVCAMEPLHVSPEVSRHPAQEVSLLALATVTKVIVVTVRPVL
RVRFTHSLRADPNTLPLLSWQFVVIQVSASTRIIDPVLAFGRQGTIYFFQVNIPSFDKMV
FVPLQKIQVQYTVQNFTWLNSRTFVALDTSENLHVLDVRSQEELEVLDMSDVQMVYGTSH
FKGHATGGNVSKAMVAAAERACYHSMAGCGAQVLLLGLTSVHVLSLRTWLERLELLYQQQ
QYAEALRLTCSLYRDEAKAVCGLVGKKVRRQHQVATYAQQLLEALAAGPPDRIQPVVPLC
VQLALLIKEHVPDILDKLYTMLPTEVKGKFLDSLPVHLLDGELRSPSPALAKDLVSQLAS
MDQFELLERCLVCLDVACLDLHQVMTLCWKHSLYDGIIYVHNQALNDFTTPIKELMAVLW
QALESGKQLTDNQVLLGNKMLVYISCCLAGRGYPHGELAADQVAVVKKDVFQYITSLRGS
GTDNHGTFPYLRTLLHFSTREFLNVLALAFEEPEFGTEAGLAQKQRLVDILLQIMVQGEG
FLPTQVGALFTFLARQLAQPDNNLFVDRLLFEQVLEHLTHPGDETQQEERQQALLELLQA
GGLASVDQAHLLDLAEQARFYRVCEYLYEKQRLYHKVFLCYLNDPSRELQSFDYAVRIFA
SPNVSEKEKALLEDQLVNSLEALMKVDSRATSQLMLQYLAHRVDDIMRHLEGQPKVLYQF
LKGVWTSREASSLTQSAKDTDSMTAAVQEQYTELMCQFEPDAVAPFLVSAEGYRIEETLE
ICRRHNVLDATAYLLEKTGDVHGALHILLQVLDEKLQACAQQGPMREQLLQEARVRLQAV
VQLCQRSCPFLSAAEREALWFPVLERVMAPQRQLRSALGADKDFLSLTHQLLGSMMGFVA
LPNILHKLMQDPAYNTGKFGEVRHFVMKMLDTHNYEKALLRTTNRLLSSDVHMHLRQLKA
AANRAYVSHTAACVACNRGFFEPGGVVMFRCSHCYHKSCLAALGPGERASEVYCQRCRTQ
PLGQPLECPTQVASSTSRSLPDTLLPVLLKDNLQLHLAPARSPDIKLDI
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggacgactccagtgacgtcgtcgacgaccgactgcgaagtgattccatcgctacagag
gacgccgcgcttgcgtttgatatagaggagttggacgacaaggaatttgagttgccaccc
gtggaaaaccccccaacgctggaaagcatattgaacgaagtggatggaggctcgctgagt
gacgaagaagtgccaaaccaagcactcttccacggaaactgcgattcggtctcacttgcc
agtgccgactcgaggaatctaccgactgatcgagttagtgctcgtccgagcagcatcttg
cgacatgtcatcctgcgaggagtgtcttcccagctacggtcagccatggagcgcgttgac
tctggaaaacccaccgctatggccgtgtcctcactaatcgctgtgggaaccttccacggc
ttggtgctggtgtttgatcccgaacaagctttgaagtggtgcctgggaagcatacagctg
ggcgagcagtatggttccgtgtccgcgatgggcttcaatggcgactgcagccggctactt
tgcggatatgccaaaggtcagctgacaatgtgggacctgtcgaatggaaagctgctacga
acaatcacagacatccatccgcctcagatggccattctgcatgtcaagtttacagacgat
ccaacgcttgccatctgcagcgacagcggtggctctgtatatgaacttaactttagaaag
gtgctcaacagccggacgtgcgactcggtgtgcattttttccggaagtcggggcgaggtc
tgtgccatggagccgctgcacgtgagccccgaggtgtcgcggcaccctgcccaggaggtg
tccttgctggcgttggcgactgtcaccaaggttattgtggtgactgtgcgcccggtgctg
cgtgttcgtttcacccattctctcagagcagacccaaacacattgccgctgctgagctgg
cagtttgtggtcatccaggtgtctgcttcaacgcgaatcatcgaccctgtgctagccttt
ggtcgccagggcaccatatactttttccaggtcaacattccaagcttcgacaaaatggtt
tttgtgcctttacagaaaatacaagtgcaatacacagtgcagaatttcacttggctgaac
tcacgaacgtttgtcgcattagatacgtcggaaaatcttcatgtgcttgatgttaggtcg
caagaagaacttgaggtgctggacatgtcagatgtgcagatggtttatggtacgagccat
ttcaaagggcacgctactggtggcaacgtgagcaaggctatggtggctgcagccgagcga
gcttgctaccactctatggcaggttgtggggcccaagttctgcttctgggcctgacatcc
gttcatgtgctcagcctccgcacatggctagaaaggctggaactcttgtatcaacagcag
caatatgcagaggccctccgcctgacgtgcagtctttaccgagatgaggcaaaggcagtg
tgtggtctggtgggcaagaaagttcgccgccagcaccaggtggccacttatgcccagcag
ctgcttgaggcccttgcggctggcccgcctgaccgaattcaacctgtggtgcccctgtgt
gtccagcttgctttgctgatcaaggagcatgtgcccgatatattggataagctgtatact
atgctgccaactgaggtgaaaggcaagttcctagacagccttccagtgcatctgctggat
ggtgagctgcgtagccccagccctgccttggccaaggacttggtgagccaattggccagc
atggaccagttcgagctcttggaacgttgccttgtgtgcctggatgtggcgtgcctggac
ctccaccaggtgatgacactgtgttggaagcacagcttgtacgatggcatcatctatgtg
cacaatcaagccttgaatgatttcaccacacccattaaggaactgatggctgtattgtgg
caagccctagagtctggcaagcagctgacagacaaccaggtgcttttgggcaacaaaatg
ttggtttacataagttgctgcttggcagggcgaggctacccacatggggaacttgctgca
gatcaggtggctgtagttaagaaggatgtgtttcaatacatcacttctctgcgaggatca
ggcactgataatcatgggacatttccatatctgaggacattgcttcacttcagcaccaga
gagttcttgaatgtactggccttggcttttgaggaaccggagtttggcacagaggcaggg
ttggcacaaaagcagcgcctggttgatatcttgcttcagattatggtccagggtgaagga
tttctgcctacgcaagtgggagccctgttcacattcctggccaggcagttggcacaaccg
gataacaacctctttgttgacaggctcctcttcgagcaagtactggagcatttgacgcac
cctggggatgagacgcagcaagaggaacgccagcaggctctgcttgaactgctgcaagca
ggtggcttggcttcagtcgaccaagcacaccttcttgatctcgctgagcaggcccgtttt
tatcgggtgtgcgagtacttatacgagaagcaacgcttataccacaaagtttttctatgc
tacttaaatgacccttcccgcgagctacagagttttgactatgccgtgcgcatctttgcc
agccccaatgtgagtgagaaggagaaggcacttcttgaagaccagctcgttaacagcctc
gaggccctcatgaaagtggacagcagggccacttcacagctgatgctgcagtaccttgcc
catcgcgtggatgacatcatgcgccatctggagggtcagccgaaagtgctctatcagttt
ttgaagggtgtctggactagcagggaagcctccagcctgactcagagtgccaaagacaca
gatagcatgactgctgcagttcaggagcagtacactgagctcatgtgccaatttgagcca
gatgcggtggccccctttctggtctctgcagaaggctatcgcatagaggaaacgctggag
atctgccgcaggcacaacgtcttggatgccacagcttacctgttggagaagactggtgat
gttcacggggctttgcacatactactgcaggtgctggatgaaaagttacaggcatgcgcc
cagcagggccccatgcgagaacaactgctgcaggaggcacgtgtgcgacttcaggctgta
gtgcagctgtgccagcgcagctgccccttcctgagtgcagccgaacgtgaggccctctgg
tttccggtcctcgagagggtcatggcaccccagcgtcagctacgatcggctttgggtgct
gacaaagacttcctgtcgctgacccaccagcttttggggagcatgatgggctttgtggct
ttaccaaacatcctgcataagctcatgcaggatccagcttacaacacgggcaagttcggt
gaagtgcgccactttgtcatgaagatgctggatacacacaattacgagaaggcacttcta
cgtaccactaatcggttgctgagcagtgatgtgcacatgcacctacgccagctcaaggca
gccgccaacagggcgtatgtgtcgcacacagctgcctgtgttgcatgtaatcgaggcttc
ttcgagccaggtggtgtcgtcatgtttcgttgcagccattgctaccacaagtcctgtctg
gcagcccttggtcctggagaacgagctagtgaagtgtactgccagcgctgcagaacacag
ccactgggacaacccttggagtgccccactcaggtggcatcgagcacatcgcgaagcctc
ccagacacattactgccagtgctgctgaaagacaacctccagctccaccttgcacctgcg
cgttctccagacatcaagctggacatctga
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