Rhipicephalus microplus (southern cattle tick): 119172509
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Entry
119172509 CDS
T07403
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119172509
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rmp03310
]
119172509
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119172509
Nuclear receptors [BR:
rmp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119172509
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119172509
NCBI-ProteinID:
XP_037279541
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Position
6:complement(164642791..164840323)
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AA seq
505 aa
AA seq
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MSWSNSYTKVEVVQPQTSSGSIKAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS
SVVNYQCPRQKNCVVDRVNRNRCQYCRLQKCLALGMSRDAVKFGRMSKKQREKVEDEVRF
HRAQLVRPQGGAVASTAAATSTQPTQQATETSPDSSVFDQQQTPSSSNQVVPFLNGGYPY
SEELASYTPNGYAYAATATIAFEMSTDYVDSTTFEQRQQLDSTADTNGLLSTTTPVAAVP
ASSLASHLEDSDLKSASQEDLLAKTVSDAHNRTCLYSTEQIQELMRKPLDISRVMLYKNM
AHEELWLDCAQKLTQIIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELCILRMSRYFDV
ATGSVLYNDSLLPMDAFITQETQEIKLVNNAFNFVRSIAEMKLTETELALYSAYVLLAPD
RPGLKGISEIQRLNAAILKSLRYELGKTHEQPYKGDVSAFDCLLAKLSSLREVSLLHMDA
LAKFRRTVPHLEFPALHKELFSVDI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggagtaacagctacactaaagtcgaggtggttcagccccagacatcgtccggc
tccatcaaagcccaaattgagattatcccatgcaaagtctgcggcgacaaatcttctgga
gtccactacggcgttatcacgtgtgaaggctgcaagggtttcttcaggagaagccagtca
agcgtcgtgaattaccagtgcccccggcaaaaaaactgtgttgttgatcgcgtcaacaga
aaccgatgccagtactgcagactacaaaagtgtctggcactaggaatgtctcgagatgcg
gtcaagttcggccgcatgtccaagaagcagcgggagaaagtggaagatgaggtgcgcttc
caccgggcacagctggtgcgcccgcaaggcggagcggtggcctcgacggccgctgccaca
tcgacgcagcctacccagcaggccaccgagacgtcgcctgacagctcggtcttcgaccag
cagcagacaccgtcatcctcaaaccaggtcgtgcccttcctcaacggaggatacccttac
tccgaggaactggcgtcgtacacacccaacgggtacgcgtacgccgccacggccactatt
gcttttgagatgagcaccgactacgtggacagcaccacgtttgagcagcgccagcaactg
gactccacagcagacaccaatggtctcctctcgaccaccacgcctgtagccgctgtgccg
gcctcttccctcgcctcgcatctcgaagattcagatttgaaatcggcttcccaagaagat
ctgctcgcgaagactgtatcggacgcgcacaaccgcacctgcctctacagtacggaacag
atacaggagctgatgagaaagccactagacatctctcgagtcatgctctacaaaaatatg
gcacacgaagagctgtggcttgactgtgctcagaagctgacacagataatccagcagatc
atcgagtttgccaagatggtaccgggcttcatgaaactttcccaggacgaccagatcgtt
cttctgaaagcagggagttttgagttgtgcatactgaggatgagcaggtactttgacgtg
gcaacaggatcggtgctctacaatgacagtctgcttccgatggatgcttttatcacgcaa
gaaacccaagagatcaagcttgtaaataatgccttcaactttgtgcggagcatagctgag
atgaagctcacagagacggaactggcgctctactctgcctatgtgctgcttgctccagat
cggccaggcctgaagggcatctcggagatccagcggttgaacgcggccatcctcaagtct
ttgcgctacgagctgggcaagactcacgagcagccgtacaagggcgatgtgagcgccttt
gactgcctgctcgccaagttgtccagcttgcgcgaggttagcctgctgcacatggacgcc
ctggccaagttccgacgcacagtgccccacctcgagttccctgctctccacaaagagctc
ttttctgtcgacatctga
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