Rhipicephalus microplus (southern cattle tick): 119172758
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Entry
119172758 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119172758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119172758
03009 Ribosome biogenesis [BR:
rmp03009
]
119172758
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119172758
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119172758
Complex B
119172758
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119172758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
FA_FANCE
Motif
Other DBs
NCBI-GeneID:
119172758
NCBI-ProteinID:
XP_037279800
LinkDB
All DBs
Position
6:66717321..66718853
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AA seq
510 aa
AA seq
DB search
MESQLILNPEVPLGPANGPNEPLPPNPLVNADPLGEFIDGMSENSKMWYLSKGDSYLVQH
CIGRLRTASVGNVHGPGPLTCGDTHLPPVQRNTCHEHFRTVRRSADEVHEYRKKNRITIV
NGRRVPKPLLHTYEANFSACLAVALEANIYPSSPTPTQAQCWPIALEGRDLLGVLGSGAQ
GKTLAYILPTIVHVLQQPHQEHRHSFMTLVLTPTPEDAREIQRVVSEFETYTRVRAKCVC
SGDSKDQQLSDLRYGFEICVATPGRLHTLIKEAMLDIGRCRYLVLDGADCMVDMGFEQQL
MRIAGSTRPDRQTIMWMSRRPRHLYRLVDALLKEYVEIHIGMCPASPDQSVQPVVLVTAE
AEKEAKLVGLLQDILDRQAEAAAGKVIVFAETKKRVDDLVSNLRLCNWPVVGVHGGTSDS
ERNWALATFRLGKARILVVTDAATRQLSSNSVCFVVNYDYPSSAEVYSRRLSHVSHSRGH
DYGVAYTFIKPDDSRCARQMIGIIFFVLQR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccagctcatcctcaaccctgaagtgccactggggcctgccaatgggcccaac
gagccgctgccccccaatccgcttgtgaacgccgaccccttaggcgaattcattgacggc
atgtccgaaaattcgaaaatgtggtatctgtcgaagggcgatagctaccttgtgcagcat
tgcatcgggcgcctgagaactgcgagcgtcggcaacgtccacggacctggacctttgacc
tgtggtgacacgcatctgccacccgtccagaggaatacctgccacgagcacttcagaact
gtgaggcggtctgcggacgaagtgcacgaatatcgaaagaagaataggataacgatcgtg
aatggacgtagggtcccaaagccactactgcacacttacgaagccaacttctccgcatgc
ctagctgtggccctcgaagcaaacatctacccctcctcccccacacccactcaggcccag
tgctggcccatagcactagagggcagagatctacttggcgttcttggatctggagctcaa
ggcaagaccctggcttatatcctcccaacaatcgttcacgtcctacagcagccgcaccaa
gaacaccgccatagtttcatgacactggtactgacaccgacaccggaggacgcccgcgaa
attcagcgagtggtgagtgaattcgaaacctacactcgagtccgcgctaagtgcgtctgc
tccggggactcgaaggaccaacagctgagtgacctgaggtacggctttgaaatctgcgtt
gcgacgcccggtcgtcttcacacgttaatcaaagaggctatgttggacatcggccggtgc
agatatctcgtgctggacggagcagactgcatggttgacatgggcttcgagcagcaactt
atgcgtatcgctgggtccactaggcccgatcgccaaaccataatgtggatgtccagaaga
ccaaggcacctttatcggcttgtggacgcactgcttaaggagtacgttgaaatacacatc
gggatgtgcccagcctcgccagaccaaagcgttcaacccgtagtcctcgtcactgctgag
gctgagaaagaggccaagcttgtgggactactacaggacattctggacaggcaagcggaa
gcagcagccggaaaggtgattgtgtttgccgaaacaaaaaagcgtgttgacgacctggtg
tccaatctgcggctctgtaactggcctgtcgttggcgttcatggcgggacttcggatagc
gagcggaattgggcgctggcaacattccgtcttggcaaggcgcgcatcttggtggtgact
gatgcggccacgagacagctgtcctcaaacagtgtgtgctttgtggtcaactatgattac
ccgagcagcgctgaggtgtactcaagacgacttagtcatgtatcgcactcaagaggccat
gactatggcgtggcgtacacttttattaagccggacgacagccgatgcgcccgacaaatg
atcggtattatattcttcgtgcttcaaaggtga
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