Rhipicephalus microplus (southern cattle tick): 119172806
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Entry
119172806 CDS
T07403
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119172806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119172806
03036 Chromosome and associated proteins [BR:
rmp03036
]
119172806
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119172806
Coactivators
SAGA/TFTC/STAGA complex
119172806
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119172806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119172806
NCBI-ProteinID:
XP_037279851
LinkDB
All DBs
Position
6:complement(85033239..85035317)
Genome browser
AA seq
676 aa
AA seq
DB search
MNPYNAAVPGTRLRAPRMVVGSSVRQPRNIQPIIPRPGPARANIAQSNAVALRTGIMQGA
VVFKTSDGKLQFVNVHRNTMRPLSPSPVASRGPFRVPAPPALAPAQRPQRVMQQMPVRYA
TAAANITNRPPGLALTPAGIVCVSQAQIMPPPQSMGVKIVPTVAAATQQLSIQTNPMAVG
SQEAAANAPQMSSDMAKQKCRNFFSTLMRLASDQPENTAMNVKRLIQGLVDDTMQPEEFT
TKLERELCSNPQPCLIPFLRKSLPLLRHALLTNELSIEGIRPPPRSALCIASPSPPIVHS
VQKTPVARSVLSGAAAAQLHIMPQSALTTGQMATPVDLQGLLAQQHRVAASVRPSPAGGG
IASGGGKSLLLARPPNIAAALSPAAGGVLPFKVPAPVSTAAQPKVSLSTSTGSVCAGGAG
TSHDEKKRPAGPALIDEDINDVPTMGGVDVDEECQANLSPSDDDAEARSCKDENFLFADA
LRKRISALAAVHGIDEVPDDVVALVSHATQERLKTFIEKLSVITEHRQENMRCDPHHEVT
QDVRRQLRFLGELERAENRRHEEDERELLLRAARSRAKAEDPEQLELKQRARDLQKAELE
EARQREANITALLAIGSRKRPVPLVAPGGGSGKQPFHAQMYRPRVKRVSTRDVLFLMEQE
RSNFSSEFIYKAYMKY
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttacaacgctgcagtacctgggacaagactccgcgcaccaaggatggtggta
ggcagctcagtacggcagccgcgtaacatccagccgatcatccccagacctggaccggcg
cgcgccaacatcgctcagtcaaatgccgttgccttgcggacgggcatcatgcagggcgca
gtagtatttaagaccagtgacggcaaactccagtttgtcaacgtgcatcgtaacaccatg
cgacccttatcacccagtccagtggcaagccgaggaccatttcgggtgcctgccccacca
gccctagcaccagcacaacgaccacagagggtgatgcaacagatgccagtccggtacgct
accgcagccgcaaacattacaaatcggcctcccggcttggcattaacaccagctggcatc
gtctgcgtctcgcaggcacagatcatgccaccgccgcagtccatgggcgtcaaaatagtt
cctaccgtcgccgctgccacccaacagctgtccattcagacaaaccccatggcagtaggc
tctcaagaggccgccgccaacgcgccacagatgtcctcggacatggcgaaacagaagtgt
aggaacttcttctcaacgctcatgcgtctcgcgagtgaccagcctgagaatacagccatg
aacgtgaagcgactgattcagggacttgtcgacgacacgatgcaaccggaagagttcacc
accaagttagaaagagaactgtgctcgaaccctcaaccatgtctgattccctttttgcgc
aaaagtcttcctttactgagacacgcactcctgaccaatgaactttccatcgaaggcatt
cggcctccaccgcgaagcgccctctgtatcgcgtctccttctccgcccatcgtgcatagc
gtacaaaagacccctgtcgcaaggtccgtgttgtcaggtgccgccgccgcgcagcttcac
attatgcctcagagcgcccttaccaccggtcaaatggccactcctgtcgatctacagggc
ctgctcgcccagcaacaccgtgtcgctgcatctgtgcgtccttctcctgccggcggcggc
atcgcatcaggaggcggcaagagtctgctgctggccaggccgcccaacattgctgccgct
ctttcgccggccgctggtggtgtattacctttcaaggtaccggctcccgtgtcgacggcg
gcgcagccgaaggtttctctgtctacgtctaccggaagcgtctgcgccggaggcgcaggg
acgagccacgacgaaaaaaaacgacccgcaggaccagcgctgattgacgaagacatcaat
gacgtgcccactatgggaggagtcgacgtggacgaggaatgtcaggcgaatctttcccct
agtgacgatgatgcggaggcccgctcttgcaaggacgagaactttctcttcgccgacgcg
ctgcgcaagaggatcagtgccctggccgcggtccacggcattgacgaggtgccggacgac
gtcgtggctttggtgtcccatgccactcaggagcgcctgaagacattcatcgagaagctg
agcgtgatcacggagcatcgccaggagaacatgcgctgcgacccgcaccacgaggtcacc
caggacgttcgtcggcagctgcgcttcttgggggaactggagcgggccgagaatcggcgg
cacgaggaagatgagcgtgagcttctgcttagagcagcgcgtagccgagcgaaggctgaa
gaccccgagcagctcgagctgaagcagcgagctcgagacctgcaaaaggccgagttggaa
gaggcgagacaacgagaggccaacatcacggcgctccttgccattgggagccggaagcga
cccgtacctctcgtggcaccgggaggagggtctggaaaacagccttttcatgctcaaatg
tacaggcccagggtgaagcgggtcagcacgcgggacgtgttgttccttatggagcaggaa
cgaagcaatttcagcagcgagttcatctataaggcatacatgaagtactga
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