Rhipicephalus microplus (southern cattle tick): 119172921
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Entry
119172921 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119172921
03036 Chromosome and associated proteins [BR:
rmp03036
]
119172921
Transcription factors [BR:
rmp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
119172921
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
119172921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119172921
NCBI-ProteinID:
XP_037279963
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All DBs
Position
1:complement(132018096..132020554)
Genome browser
AA seq
736 aa
AA seq
DB search
MDFLEFPDVFKEDRGGMTSGRLKMTNQGVVFKNSKTGKVEQVQGSDMESISWQRIGAGYG
LRIMMKSGGMYRFGGFQDDEQERLAKFFQHHFELPLASRELCLKGWNWGTARFEGSVLSF
DVDKHSAYEIPLANVSHCTTAKNEVTLEFHQNDDAAVSLMELRFHIPTDPNSDTDPIQAF
RNNVLSKASIIQATGDAMVTFKELQCLTPRGRYDIKIFPSFIQLHGKTFDYKIPLTAVLR
LFLLPHKDNRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEDTSIELALSDADIQEKFEDK
LQKNMSGPTFEVISRVMKAVVQRKITVPGNFKGHGGTNCITCSYRAGNGLLYPLERGFIY
IHKPPVHIRFDEISCVNFARSGGSTRSFDFEVEAKSGLVHTFSSIEKEEYGRLFDYVSEK
KLRIKNRGTLGGTKEKPNYNDDELIDSDAEDAPDAYLARVKDEGRQRDEGDSDESSDESF
NPGESGSEVAEEFDSNVESSSEDSDAGSDGGKGGSGSDSGSEKREKPKKEKKEKKSRSAK
TVKEPGMRKPRRPKKERDANKPKRPPSAYFLWLAENREKIKKDNPGFSITDVTKRAGELW
KEVTDKSKWEEQAAEAAAKYKEAMAEYQASQKDRPQESDDEKEQKKSVKKSKPSSTPKPK
PASSPLKGNFKSKEYISSSGSSDDDDEKKKKSTKVKKEPAESPKSSPTRDKSEEEASAST
PASSGDENMSGSGDDD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggattttctcgagttcccagatgtcttcaaggaggatcgcggcggcatgacgtcgggc
cggctgaagatgaccaaccagggagtcgtcttcaagaacagcaagaccggcaaagtggag
caagtccagggctccgacatggagagcatcagctggcagcgcattggcgccggctacggg
ctgcgcatcatgatgaagtcgggcggcatgtaccgcttcggcggctttcaagacgacgag
caggagcggctggccaagttcttccagcaccacttcgaactgccgctggcgtcacgcgag
ctgtgcctcaagggctggaactggggcacggcgcgcttcgaaggcagcgtgctgtcgttc
gacgtggacaagcactctgcctacgagattccgctcgcaaacgtgtcgcactgcacgacg
gccaagaacgaggtgacgctcgagttccaccagaacgacgacgcggccgtgtccctcatg
gagctgcgcttccacatcccgaccgacccaaactcggacacggacccgattcaggccttc
cgaaacaacgtgctttccaaggccagcatcatccaggccaccggagacgccatggtcacc
tttaaagagctccagtgcctcacacctcgcggtcgctacgacatcaagatctttccctca
ttcatccagctccacggtaagacgttcgactacaagatcccgctcacggctgtgctgcgc
ctgttcctgctgccgcacaaggacaaccgccaggttttctttgtgctcagcctggatccg
ccgatcaagcagggtcagacgcgttaccacttcctcatacttctgttcaacaaggaggaa
gacacgagcatcgagctggccctctcggacgccgacattcaagagaagttcgaggacaaa
ctgcagaagaacatgtcgggccccacgttcgaggtgataagtcgcgtcatgaaggccgta
gtgcagcgcaagatcactgtgccgggcaacttcaagggtcacgggggcaccaactgcatc
acctgctcgtacagggcgggcaacgggctgctctaccccctggagcgaggattcatatac
attcacaagccacccgtgcatattcgcttcgacgaaatttcctgcgttaactttgcgcgt
agtggagggagcacacgttcatttgactttgaggtggaggccaaaagtggcctcgttcac
acgtttagcagcattgagaaggaggagtacgggaggctcttcgactatgtgagcgaaaag
aagctccgaatcaagaaccgtggcactctcgggggcaccaaggaaaagccaaactacaac
gacgacgagctcatcgactcggatgcggaggatgccccagatgcttacttagcccgtgtc
aaagatgaaggccgccagagagacgaaggggattcggatgaatcgtctgacgagtcgttc
aaccctggcgagtcgggcagcgaggtggccgaggagtttgacagcaacgttgagtccagc
tcagaggacagtgatgctggtagcgatggaggcaagggaggcagcggtagtgacagtggc
agtgagaagcgtgagaaacccaagaaagaaaagaaggagaagaaatcgaggagtgccaaa
actgtaaaagaacctggcatgcggaagccacgtcgcccaaagaaggagcgtgacgccaac
aagcccaagcggccaccgagtgcttacttcctttggttggccgaaaaccgtgaaaagatc
aagaaggacaacccaggtttcagtattaccgatgtcaccaagcgggccggcgagctctgg
aaagaggtcacagacaaatcgaagtgggaggaacaggctgccgaagctgccgcaaagtac
aaggaagccatggctgaatatcaggctagccagaaggatcggccacaggagagcgatgac
gagaaagaacagaaaaagtccgtcaaaaaaagcaaaccgtcaagcacaccgaaacccaag
cctgcatcgtcacccctgaagggaaatttcaagagcaaggagtacataagtagctcgggc
agtagtgatgatgatgatgagaagaagaagaagagcacaaaggtcaagaaggaacctgcc
gaatctcccaaaagttcaccaacccgtgataagtctgaggaagaggcttcggcaagcacc
ccagcttcttccggagacgagaacatgtctggaagtggcgatgatgactga
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