Rhipicephalus microplus (southern cattle tick): 119172950
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Entry
119172950 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmp03036
]
119172950
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119172950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119172950
NCBI-ProteinID:
XP_037279989
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Position
1:132084202..132137383
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AA seq
1273 aa
AA seq
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METPDLLSAALDESGIGAEEMANNHALDPSQNLSRYQIPPHLMNYLPPHMIQQMAQHMAQ
QMAQAMAQQMPFPQAGPGGKFAPGMGPPGPGMDKGPSAPYYMVPPFGFKAGNGGTPPYPI
FRPPFGMGSGVMPPQPQQTGEDAEEEEELGLAETYAEYTPSKLKIGERHPDPVVETSSLS
SVQPPAVWYNLSIPEEVIDRALLSALQLEAIVYASQQHEVLLPDGSRAGFLIGDGAGVGK
GRTIAGIIYENYLLGRKRAIWVSVSNDLKYDSERDLRDIGAGKIEVHSLNKFKYAKISSK
VNGSVKKGVIFSTYSSLIGESQGGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPV
GSSKPTKTGLTVLELQNKLPKARVVYASATGASEPKNMAYMTRLGIWGEGTPFREFSDFI
SAVEKRGVGAMELVAMDMKLRGMYMARQLSFTGVSFKIDEIPLAKQFIAMYNESVKLWVD
ARAMFQEAAELMEGDSRIKKTMWGQFWASHQRFFKYLCIASKVPHVVSLAREAVKNDKCV
VIGLQSTGEARTLEQLEEQGGELSDFVSTAKGVLQTLIEKHFPAPNRKKSLRLLGLGGIV
DDPIPSPPPSSSTGGHKRKSARQARQGVKRYREASSGDDYDSDVEVKSEPESDFEPSVSS
SAAEDSEGSSAVESDAEDDFNPFGDDSDSDDPWASRKNKSKNKNKKQKTKKKKKYEKPTR
NGAAPQPVVRNVPTVDSEKKAAAMKQELLERLENLGDKLPPNTLDQLIDELGGPENVAEM
TGRKGRVVSTDNGTIQYESRSEVDVPLETLNLTEKQRFMDGEKHIAIISEAASSGISLQS
DRRAKNQARRVHITLELPWSADRAVQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVA
KRLESLGALTHGDRRAGESRDLSRFNIDNKYGRAALETMMRGLMEMEIPPLVPPPEDYEG
DFFADCRKALVGVGLVNEDEFSKMQTLDKDYNNMSKFLNRILGIEVELQNALFKYFTDTL
DAIITEAKKTGRYDLGILDLGTAGDNVKRVKVDEFIRTHATGTAKTELHTVSVERGLSFE
ASQDIWKELTSKDEGYYLSNQVRCGKKTAVLAVADQARRSKEKKEKLFRLYRPNTGLQVR
QESLNELKSKYKKVTPDEAQPHWQEQYESSENTCSHIYWYNSCRKKTMGMACEIGLRRRT
YHVLSGSVLAVWAKVESVLSSVHGHHSSSKLQVVRLKTEDNLRIVGTIIPSNCVAPLVNV
LSQDAEKTNSETF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggagactccagacctcttgtcagcagctctggatgagtctggaatcggggcggaggaa
atggccaacaaccatgcgctggaccccagtcaaaacttgtcacgctatcaaattcctccg
cacctgatgaactacttgccgcctcacatgatccagcagatggcacaacacatggcccaa
cagatggcacaggcaatggctcagcagatgcctttccctcaagcaggcccaggcggcaag
ttcgccccaggaatgggtccccctggccccggcatggacaagggtccgagcgcaccatac
tacatggttccaccttttgggttcaaggccggaaatggaggaacacccccgtaccccata
tttcgaccgcctttcggaatggggtcgggagtcatgcctccccagcctcaacagactgga
gaggatgctgaagaggaagaggaactgggactggctgagacgtacgctgaatacactcct
tctaagctgaaaatcggcgagcggcacccggatcctgtggtggagaccagctctctgtcg
agtgtacagccgccggctgtgtggtacaacctatctattcctgaggaggtcattgaccgt
gctctcctatccgcacttcagctggaagcaattgtctatgcaagccagcagcacgaagtg
ctacttcccgatggaagccgggcggggttcctcattggagacggtgctggtgtgggcaaa
ggccgaaccatcgcagggattatttatgaaaactaccttttgggccgcaagagagcaatc
tgggtgagcgtgtccaatgatttgaagtacgactccgaaagagacctgcgggacataggt
gctggaaaaattgaggttcattctttaaacaagttcaaatacgcgaagatctcctccaag
gtgaatggcagcgtgaagaagggcgtcatattttccacgtactcgtctctgattggtgaa
agccaaggtggtggcaagtacaagacgcgactcaagcagctcctgcactggtgtggcgat
gatttcgacggagttattgtatttgacgagtgccacaaagccaaaaacttgtgtcccgtg
ggctcctccaaaccaaccaagactggcctcactgtgctagaactgcagaacaagcttccc
aaggcacgagtggtctatgccagtgctacaggtgcctccgagccaaagaacatggcctac
atgactcgcctaggcatctggggtgagggaacaccgttccgggagttctcggatttcatt
tcagctgtcgaaaagcgaggcgttggggccatggagttggtcgccatggacatgaagttg
agaggcatgtatatggctcgccagctgagcttcactggagtatccttcaagattgatgaa
atacctctggcaaaacaattcattgccatgtacaacgaatctgtgaagctgtgggtggat
gctcgtgcaatgttccaagaggcagctgagctgatggagggtgattcgcgcatcaagaag
actatgtggggccagttctgggcctcgcaccagcgtttcttcaagtatctctgcatcgct
tcgaaggtaccccacgtggtgtccctcgcccgagaggctgtcaaaaatgacaagtgcgtg
gtgattggcctgcagtccactggggaggctaggacactggaacagctagaggaacaaggc
ggtgaactctcagactttgtctctacggccaagggagtcttgcagactcttatcgagaag
cattttccggcacccaaccgcaagaagtcgctgaggcttctggggctaggtggcattgta
gatgacccgatcccctcgccgcccccgtcttcgtcgacggggggacacaagcggaagagt
gctcgacaggctcggcagggggtgaagcgctacagggaggcttcctcgggtgacgactac
gacagcgacgttgaggtcaagagtgagccggagagcgactttgagccgtctgtgtccagt
tcagcagcggaggactccgaaggcagctcggctgtcgaatcggacgcagaagacgacttc
aacccttttggtgatgactcggacagcgacgatccctgggcaagtcgtaagaacaaatct
aaaaataaaaacaagaagcaaaaaaccaaaaagaagaagaagtacgagaagcccacgagg
aacggcgccgctccgcagccagttgtccggaatgtgcccaccgttgacagcgaaaagaag
gcagcagccatgaagcaggaactgcttgagcgactggaaaaccttggggacaaactgcct
cccaacacactggatcaactcattgacgaactcggcgggcccgagaatgtcgctgagatg
acgggcaggaaagggcgtgtggtgagcacagacaatggtacaatccagtacgagtctcgg
tccgaggttgatgtgcccttggaaactctaaacctcaccgagaaacagaggttcatggac
ggtgagaagcacattgccatcatctctgaggcagccagctctggtatctcgctgcagtcg
gacaggagagcaaaaaaccaggctcgtagggtccacatcaccctcgagttgccctggagt
gcagacagagcagtgcagcagtttggccgaacgcacaggtcaaaccaggtgaatgcccca
gagtacatattcctcatttcggacttggctggtgagcgaagattcgcttccatcgtggct
aaacgtctcgagagcttgggtgctctgacccatggcgacagaagagccggcgagtccaga
gatctttctcgttttaacattgacaacaagtatggccgagctgccctggagaccatgatg
cgtggcctaatggagatggaaatcccgcctctagttccaccacctgaggactacgagggg
gatttctttgccgattgccgaaaagcactggtgggtgtaggcttggtgaatgaggacgaa
ttcagcaagatgcagacgcttgacaaagactacaacaacatgagcaagtttctgaaccgc
atcctcggcattgaagtagagcttcagaatgccttgttcaagtacttcacggataccctg
gatgccatcatcaccgaggccaagaaaacaggccgttacgacctgggcatcttggacctg
ggaacggctggcgacaatgtcaagcgcgtgaaggtggacgagttcatccggactcacgct
actggcaccgctaagacggagctccacacagtgagtgtcgaacgtgggctctctttcgaa
gcctcgcaggacatctggaaggagctgacgagcaaggacgaaggttactacctctccaat
caggtgcgttgtgggaaaaagactgcagtgttggctgttgcggaccaagcacggaggtca
aaggagaagaaagaaaagctgttccggctgtacaggccaaacacgggcctccaggttcgc
caggagagcctcaatgagctgaagagcaagtacaaaaaggtcacgccagatgaagcccaa
ccccattggcaagagcagtatgaatcatctgaaaacacatgtagtcacatctactggtac
aacagctgccgcaagaagaccatgggcatggcgtgcgagattgggctgaggcggcgcacg
taccacgtgttgagtgggtcggtgctggctgtctgggccaaggtggagagcgtgctgagc
tcagtccacggccaccacagttcctccaaactacaggtggtgcgcctcaagactgaggac
aacttgcgcattgtcggtactattattccaagcaactgcgttgccccactggtaaatgtt
ctctctcaagacgctgagaagaccaactctgagaccttttga
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