Rhipicephalus microplus (southern cattle tick): 119173590
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Entry
119173590 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119173590
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119173590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
PRORP
Motif
Other DBs
NCBI-GeneID:
119173590
NCBI-ProteinID:
XP_037280293
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All DBs
Position
7:23933229..24049892
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AA seq
714 aa
AA seq
DB search
MAQFARVCFADVHSKDATLSVQELLATACESVVAADALSALRCGAFSSSGSVESGGRPES
VRRRRTLESEDSSYDSDTENPGDTTSSTRQHEDVSRTVSDTLGAEFAEYVTAGPQYASRL
EFAVKLGYTHSQVQQALRRLGPQPAQNELLAELVRLGAREQTGDSAAPRADQSSSQAEDP
LRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFRDRGHTNISVFVPSWRKEASRAETPIK
DQEILLQLEKERLLFFTPSRNVGGKRMVCYEDRYILKMAAQTGGVVVSNDNYRDLVAESL
DFKRVVEERLLMYTFVNDRFMPPDDPLGRHGPSLDAFLRKSGTLASEGPPSCPYGKKCTY
GNKCKYYHPERGNLPQKSVTERLAEQARLQLQEVKARSVIKSRDSSPGGELLKTKSLPPG
ASEAMLPKKKMPLSRTKSSVPSLLGADLLEADGGGHLSVAKRLSDPDSGLGAFSLPKGSS
VLSPPSGGAGSSSSDDTLSSGNLHRKLQRQLTLNPTFDPRLYQMRAAVSSGLVPPPAVSL
AEAVHGRAGSHENLQQHRALGRLASDSGLVAVAAGGGWGTLPGAHTEVTRIASAPDTTRQ
QRSLQQGATIQRLSSTSDTRLDAFPLAGAATPLPPSPPFPSFPGLSPHTGPGWGSLPMGR
PPPPADTASPRYRLYYHLSSIFPEEQVRAAMDLCPEETNPQKVCAAILAMFPKG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatttgcccgggtctgctttgcagatgtgcattcaaaggacgctacattgtct
gtgcaggagctgctggcgacggcgtgcgagtccgtggtggcagccgacgccttgtcggct
cttcgctgcggcgccttctcgtcttcgggctcggtagagtccggaggccgaccggagtca
gtgcgccggcgccggaccttagagtctgaggactccagctacgactcggacaccgaaaac
cctggcgacacgacgtcgtctacgcggcagcacgaggacgtctcccgaaccgtgtccgac
acgctgggtgccgagttcgcagagtacgtgacggcgggaccccagtacgccagccggctc
gagtttgccgtcaagctaggatacacacattcgcaggtgcagcaggcccttcgtcggctg
ggccctcagccggctcagaacgagctgctggccgagctggtgcggctgggcgccagggag
caaactggcgactcggcggcaccccgcgccgaccagtcctcgtcgcaggctgaggacccc
ctcaggccgatcgtcatcgacggaagcaatgttgccatgagccatggcaacaaggaagtg
ttctcatgccgaggcatcaagttggcagtggactggtttcgagacagaggtcacacaaac
atcagcgtcttcgtccctagttggcgaaaggaagcctcacgtgcggagacccccatcaag
gaccaagagatcctgctgcaactcgagaaggagcgattgctgttcttcacgccatcgcgc
aatgtgggtggcaagcgtatggtgtgctatgaggaccgctacattctcaagatggctgca
cagactggtggcgtagtcgtgtcaaacgacaactatcgggacctggtggccgaaagccta
gacttcaaacgtgttgttgaagagcgcctgcttatgtacacatttgtcaacgacaggttc
atgccccctgacgaccccctggggcgtcatgggccctccctggatgccttcctgcgcaag
agtggcaccctggcttctgagggaccaccaagctgtccgtacggcaagaagtgcacgtac
ggcaacaagtgcaagtactaccacccggagcgggggaacctgccccagaagtcggtcacc
gagcggctggcagagcaggcccgcctgcagctgcaggaagtcaaggctcgtagtgtcatc
aagagccgtgactcatcccccggtggtgagctgctcaagacaaaaagcttgccgcctgga
gcgagtgaagcgatgctgcctaagaagaaaatgcccctctcgaggaccaagtcgtcggta
ccatccctgttgggtgctgacctgttggaggctgacggtggaggccacttgtctgtggcg
aagcgactctccgatccagattcgggactcggagcattctcactgcccaaaggcagttcc
gtgctctcgccacctagtggtggtgcaggcagcagcagcagtgacgacactctgagcagt
ggcaacctccaccgcaagctccagcggcagctgactctcaacccgacgttcgacccccgg
ctgtatcagatgcgggccgccgtgtcgtcgggcctcgttccgccccctgcggtaagcctg
gccgaggctgtgcacggccgcgccggaagccacgagaatttgcagcagcatcgagccctt
gggcgactagccagcgactcgggcctagtcgccgttgcggcgggcggagggtggggcact
ctgccgggggcacacactgaggtgacacgcatcgccagtgccccagacacgacgcggcag
caacggtcgttgcagcaaggggccaccattcagcgcctcagcagcacatcggacaccagg
ttggacgcattcccgctggcgggtgcggccacaccactgccaccaagccccccgtttcct
tcttttccgggtctgagcccccacacgggtcccggttggggaagcctgccgatgggccgg
ccaccaccaccggcagacacggccagccctcgctatcgcctctactaccacctgtcgtcc
atattccctgaggaacaggtgcgtgccgccatggacctctgccccgaggagaccaatcca
caaaaagtgtgcgcagccatcctcgccatgtttcccaagggttga
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