Rhipicephalus microplus (southern cattle tick): 119173863
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Entry
119173863 CDS
T07403
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119173863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119173863
Spliceosome [BR:
rmp03041
]
Complex C
Other components
Step II factors
119173863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
eIF2A
Beta-prop_NOL10_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
119173863
NCBI-ProteinID:
XP_037280542
LinkDB
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Position
7:complement(124019192..124032550)
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AA seq
538 aa
AA seq
DB search
MAAMLSICEYASSDDDDDATKNEEIQGNFTRLPPTTQSVVAIQKKYQLNAAPEVAVKESV
CGVKPIDPTSKELLFNPKFENLFAPVVGPENPFKTQQQKAVKNTLAGYVEPAHVNDFHFE
SQRLTFNSYGYAIDPTADGSMDEGHRMVGSSEGASSSSSLTVFEKTKVRPGDKRKKAKNN
DPSDIDGFAGPWAPYKDEKRNVKPTEEEQEELDEILAKRNKKGRRTEDKPMEEKTVLHIK
DPYDYQGRSFLHVPQDVGVNLRASEPPDKCFLPKRLIHTWSGHSKGLSAIRWFPRSAHLL
LSCSMDCKVKLWEVYNERRCVRTYNGHRQAVRDIAFDNKGEHFLSAGYDRYVKLWDTETA
IWDTRTKEIVQEYDRHLGAVNTITFVDDNRRFVSTSDDKSMRVWEWDIPVDMKYIADPSM
HSMPAVTLSPNGKWLACQSMDNKIMIFSALNRFKLNRKKTFEGHMVAGYACSLDFSPDMS
YLISGDADGKLYVWDWKTTKLYTKFKAHDAVCISALWHPHETSKVATAGWDGTIKFWD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatgttgtcaatctgtgagtacgctagcagtgacgacgacgacgatgcgacg
aaaaatgaagaaatccaggggaatttcaccaggctgccgcccacaacacagtctgttgtt
gcgattcaaaaaaagtaccaattgaatgcagctcctgaagtggccgttaaggagtcggtt
tgcggcgtcaagccgatcgatcctacaagcaaggaactgctgttcaacccaaagttcgaa
aacctcttcgctcctgtcgttggaccggagaacccttttaaaactcagcaacagaaagct
gttaagaacaccttggctggttacgtcgaaccggcacatgtgaacgacttccactttgaa
tctcaaaggctaacgttcaacagctatggctacgcgattgacccaactgctgacggatcc
atggatgagggccacaggatggtcggttcgtcggaaggtgcttcttcgagcagttctctg
accgtgttcgaaaagacgaaagttcgaccgggtgacaaaaggaagaaagcgaagaacaat
gacccatcggacattgacggttttgctggtccctgggccccgtacaaggatgagaaacga
aacgtcaagccgactgaggaggagcaggaagaactggatgaaattctggcaaaaaggaac
aaaaagggtcgacgtactgaggataagccgatggaagaaaagacagtgttgcacatcaag
gacccgtacgactatcagggccggtcgttcttgcacgtcccacaggacgtgggggtgaac
ctgcgtgcgagcgagcctcccgacaagtgcttcctgcccaagcgtctcatccacacgtgg
tcgggtcactccaagggcctttcggcgatccgatggttccctcggtccgcccacttgttg
ctctcttgcagcatggactgcaaagtcaagttgtgggaggtgtacaacgagcggcgctgc
gtgcggacttacaacggccaccgtcaggcggttagagacattgcctttgacaacaagggc
gagcacttcctgtcggccggctacgaccgctacgtcaagctctgggacacggagacggct
atttgggacaccaggaccaaagagatcgtccaggaatatgacaggcatctcggtgccgta
aacaccatcacgtttgttgacgataaccgccgctttgtatccacgtctgacgacaagagc
atgcgtgtctgggagtgggacatccctgtcgacatgaaatacatcgcagacccttccatg
cactccatgcctgcggtcaccctctcacctaacggaaaatggctggcctgccaatcaatg
gacaacaagatcatgattttttcagccctcaaccgtttcaagttgaaccgtaaaaagacg
ttcgaaggacacatggttgctgggtacgcatgtagcttggacttctcaccagacatgagc
tacttaatatccggtgatgctgacgggaagctatatgtttgggactggaagacaactaag
ctatacaccaagttcaaggcccacgatgctgtttgcatcagtgcattatggcatccacac
gaaacgtcaaaggtggccaccgctggctgggacggcacgatcaagttctgggactga
DBGET
integrated database retrieval system
