Rhipicephalus microplus (southern cattle tick): 119174101
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Entry
119174101 CDS
T07403
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119174101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119174101
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119174101
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_2
TPR_19
ANAPC3
SRP_TPR_like
TPR_12
ANAPC8
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
119174101
NCBI-ProteinID:
XP_037280802
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Position
7:41775768..41779058
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AA seq
607 aa
AA seq
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MSDKEPSGGDGKTASADSSASLDAIVSEEEKQLATSAATDFHAGKYSACLETLDKLHALR
PTDPKVAHNRAVARYHASLVSMEEFGRELVESSPQLTDSLDDIDQCIPFFNHAVALFHAQ
QYRRALAILDRLFQFIEPMDETVARKMCFLHIELCLCLKQPEKALATVAYLENLVFKADS
TAADADACRVQLYKTRCLIMMRSVKASKREIKNLVSSSAGSSSQTVFLRSQLEFLRGNYR
KAVKVLATVQANDARTAAMYHNNLGCVHLCSGKPHLGSYNFAKALNTYVESSSKLDGRLY
FDLLYNLGLQNLYCGKYTSAFDCLVEAVRMQPTNSRLWLRIAECCVNRHKLDNSTDFQLK
DRKRYMVSGTAGAGPHRKIILAPSISTCKRTPAVGSAAIPVPTLEFAALCLRNVLQMLPE
ALQEAEERNSALALAAYVALCLDDPRMALKHAKDLLAQPKVTGTHSFLAHQYAAEALLLL
DGVRDAIEHLNPDLIKDLSYSFSEPEETKGKDNDKTMEENGKAYRKPWYPASPSMAKVVS
LYNLAVAYTLRGSLGKATETLRLVSVPKGPDPEIPVQALMLAVYVQLQQGHADLAKNIIK
QHLPQYK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaaccaagtggcggcgatgggaaaacggcgtctgccgacagcagtgca
tccttggacgctatcgtgtccgaagaggaaaagcaactggccacatctgcagcgaccgac
ttccatgccggcaagtacagcgcctgcctagagacgttggacaagcttcacgcgttgagg
ccaacggaccccaaagtggcgcacaaccgggcagtggctcgttaccacgcgtctttggtg
agcatggaggagttcgggcgcgagcttgtcgaaagttcgccgcaactgacggactcgctt
gacgacatagatcagtgcattccgttcttcaaccacgctgtggccctcttccacgcgcag
cagtaccgccgagccttggccatattagaccgcttgttccagttcatagagcccatggat
gagaccgtggcccgaaagatgtgcttcctccacatcgagctatgcctttgcctaaagcag
ccagagaaggccctggccaccgtcgcatacctcgaaaatctcgtgtttaaggcggacagc
acagcagcggacgccgacgcgtgccgtgtgcagctctacaagacgcgctgcctcatcatg
atgcgctcggtgaaggccagcaagcgtgagatcaagaatctggtcagctcgtcagcgggg
agcagcagccagacggtgttcctgaggagtcagctggagttcctccgaggaaactaccgc
aaggccgtcaaagttctggccacggtgcaggcaaacgatgcgcgcactgccgccatgtac
cacaacaacctcggctgtgtccacttgtgctcgggcaagccgcacctgggcagctacaac
ttcgctaaagccctcaacacctacgtcgagagcagctccaagcttgacggccggctctac
ttcgatctgctgtacaacctcggcctgcagaacctgtattgcggcaagtacacgtccgct
ttcgattgcctcgtggaggcggtgcgcatgcagcccaccaactctcggctctggctgcgc
atcgccgaatgttgcgtgaaccggcacaaattggacaactccaccgatttccagctcaag
gatcgcaagcggtacatggtgagcggcaccgcaggtgctggcccgcaccgcaagatcatc
ctggcacccagcatttcgacctgcaagcgcacgccagccgttggctcggctgccattccg
gttcccaccctggagtttgctgctctttgtctgcgcaacgtgctgcagatgcttcctgaa
gctctacaagaagcagaagagcgaaattcggcgcttgccctggccgcctacgtggcgctc
tgcctggatgacccccggatggcactgaagcacgctaaggatctacttgcccagcccaaa
gtgactggcacacacagcttcctggcgcatcagtacgctgccgaagcgttgctgctgctc
gacggtgtcagggacgccatcgaacacctgaacccagacttaatcaaggatctgtcgtac
agtttctccgagcccgaggaaaccaaaggaaaagataacgacaaaacaatggaagaaaac
ggaaaagcgtacaggaagccgtggtatccagcctctccttccatggccaaggtggtcagc
ctatacaatttggctgtagcgtacactctgaggggtagtctaggaaaagcaacggagaca
ctcaggttggtcagtgtgccaaagggccctgaccctgaaatacccgtgcaggcccttatg
ttggccgtatacgtccaacttcagcagggtcatgctgacttggctaagaatataatcaaa
caacatcttccccaatacaagtaa
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