Rhipicephalus microplus (southern cattle tick): 119174449
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Entry
119174449 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03030
DNA replication
rmp03410
Base excision repair
rmp03420
Nucleotide excision repair
rmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119174449
03410 Base excision repair
119174449
03420 Nucleotide excision repair
119174449
03430 Mismatch repair
119174449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmp03032
]
119174449
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119174449
DNA replication proteins [BR:
rmp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119174449
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119174449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
AAA_30
AAA_5
RCF1-5-like_lid
AAA_16
AAA_17
RuvB_N
RNA_helicase
nSTAND3
AAA_7
AAA_33
Motif
Other DBs
NCBI-GeneID:
119174449
NCBI-ProteinID:
XP_037281246
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All DBs
Position
1:155562843..155615541
Genome browser
AA seq
1063 aa
AA seq
DB search
MDIRKFFSATGSAPVKRAADDTKKQSDEKNKPKQSTKAVKEPAKPKAPEKEKKAAPVEVS
KRERNERVKPASSKEKKESGKKPRQRIVMFDSDSDEEEPIPKKAKKQAKECKAAAVDSDE
DSEEPIVSKKPAERTQAAISKDEPLKKATIKVNGKEQPKQKLVPVSADDFFASASISPAS
KLSLKASQAKKVSTAKESHEDDDFQKTLAKLDEKTEEKKLTTRSSPRKTSKDSESSVVKK
SSPSKGSATEKPESSKKLEKEKAATKHSPKKRKAESPVARASDSASQSSKKAEKELTHKR
ESPRKVPEKTERVTPGKQAARKEKPAPAKEKVPKEEKSAAAAAPAFRRGNAANYQSYLNR
EGPRLLGTRDIPEGAPGCLKGVTLVVTGVLECIERDDAKELLERCGAKVTQSVSRNTTYL
VAGRDSGPAKIRKAEECKVEIIDEDALYELIESRSGGDGKRKAEDAEVKEKPEEASTPKK
KRKVDPDDSSEESRSKGSPRVKEHVISPTKKSKDASTTETPSTSSSQQSRTTAEMWVDKY
KPQTTKQIIGQQGDKSNCGKLLLWLRNWHKSRLGPKKPIPKWGGGGGDGSAFKAALLSGA
PGIGKTTTATLAAREAGYSILEMNASDTRSKKSLAEHVAETLKNRTFTESGTTSKHVLIM
DEVDGMAGNEDRGGVQEMIALIKSTRIPIICICNDRSHPKMRSLVNYCFDLRFQRPQVKQ
IQAALMSIACKEGLSITPAVVQEIVMASNQDVRQALHNLSLWSSRTKTMSVSQVKADAGK
GTKDIKMGPFDVVRKILSSTEGGQSMTLNEKAALFFHDYNMVPLFVQDNYLHVQPLEAKG
DRQKHLRLVSEAADCISYGDLVERQIRQHGSWSLLPMQAFFSSVIPGELVRGHMREMISF
PAWFGKNSSTTKRHRLLRELKHHTHTRVSADRTQLSMDYVGPLLDSLTKPLIDKGADGVP
SVVSRMHHYYLQRADLDNLCDLALWPGMKDPMANIDSKVKAALTRTLNKEAFMTPYSTGD
FVKKKAKKGAGKSEKLAASQDDEENAEEEEEDEEPDPTLVDYE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgcaagtttttctcggctactggttcagcccccgtgaagagagctgctgat
gacacgaaaaaacagtccgacgagaaaaacaagccaaagcagtcgacgaaagcggtaaaa
gagcccgcgaaaccgaaggccccggagaaagagaaaaaagctgcacccgtggaagtttcg
aagagagaaagaaatgagcgggtcaagccagcgtcatcgaaggaaaaaaaggaatctggg
aaaaagccacggcagaggattgtcatgtttgattccgattcagatgaggaagaaccgata
cccaagaaggccaagaagcaggccaaggaatgcaaagctgcagctgtcgactctgacgaa
gactctgaagaaccaattgtttcgaagaaacctgctgagcgaacacaagctgcaatttca
aaggacgaacctttgaagaaggccacaatcaaagtcaatggcaaggagcaacctaaacag
aaacttgtacccgtttctgcggatgacttcttcgcgagtgcttccataagtccagcctcg
aagctatcactcaaggcgtctcaagctaagaaggtttcaactgcaaaggagtctcacgag
gatgatgatttccaaaaaacgctcgcaaagctggatgaaaaaaccgaggaaaagaagctg
accacgcgctcaagtccacgaaagacctccaaggattcagagagctccgttgtgaaaaag
tcatcaccttctaaaggcagtgctacggaaaagccagagagcagcaagaaactggagaag
gaaaaggccgcaactaaacattcgccgaagaaacggaaagcagaatcgccagttgcgcgc
gcttctgattctgctagccagtcatccaagaaagctgagaaagaactgacacataaaagg
gaaagcccgaggaaagtaccagagaagacggaaagagtaacacctggcaagcaagctgcc
agaaaggagaaacctgcacctgctaaggagaaagtacctaaggaagagaaatcggctgct
gccgccgcgcctgcctttcgaagaggaaacgccgccaactaccagagttacctcaacagg
gagggcccgaggttgcttggaacacgagacatacctgagggtgccccaggctgcctgaaa
ggtgtgacgttagtggtgactggagttttggaatgcatagaacgcgatgatgcgaaggag
ctgctggagcgctgcggtgccaaggtcacacaaagtgtcagccgcaataccacctacctc
gttgcaggtcgggactcaggcccagccaagatacgcaaggctgaagagtgcaaggtggaa
ataatagatgaagatgcattgtacgagctaatcgaaagtcgttcaggtggtgacggcaag
cgcaaagctgaggacgctgaagtcaaggaaaaaccagaggaggctagtacgccgaagaaa
aagcgaaaagtggaccctgatgacagctctgaggaaagccggtcaaagggctcgccaagg
gtcaaagagcatgtcatttccccaaccaagaaatcgaaagatgccagcaccacggaaacg
ccgtccacatccagcagtcagcagtcacggacaacagccgagatgtgggtggacaagtac
aagccgcagacaaccaagcagatcataggccagcagggagacaagagcaactgcggcaag
ttgctgctgtggttgcgcaactggcacaagagtcgtctgggacccaagaagccaataccc
aagtggggaggaggtggaggcgacgggtccgctttcaaggcagcgctgctgtccggagct
cctggcatcggcaagaccaccacggctacactcgcagcacgggaagctggctacagcatc
ttggagatgaatgcatcagacactcgttccaagaagagtcttgccgagcacgtagctgag
accctgaagaaccgcacttttacagaatctggtacaacatccaaacacgtgctcatcatg
gatgaagtggatggcatggcgggcaacgaggacagaggtggagttcaggaaatgattgct
ctgataaagtccacgcggatccccatcatctgcatctgcaatgatcgctcgcacccgaag
atgcgttccttggtgaactattgttttgacttgcgatttcagcggccgcaagtcaagcaa
attcaggctgcattgatgtccatcgcatgcaaggaaggtctctccatcacacctgctgtt
gtgcaagagattgtcatggcctccaaccaagatgtgcgacaggcactgcacaacctctcg
ctttggagctcccgaacaaagaccatgagcgtgtcgcaggtgaaggcggatgcgggcaag
ggcaccaaggatatcaagatgggtccgtttgacgtggtgcgcaagattctgtcgagcaca
gagggtggccagtccatgacgctcaacgagaaggcggcactcttctttcacgactacaac
atggtccctctgtttgtccaggataactacttgcacgttcaacctttggaagccaagggc
gaccgccagaaacacctacgattggtcagtgaagcagccgactgcatcagctatggagat
ttggtggagcggcagatccggcagcacggcagttggtcgctgcttcccatgcaggccttc
ttctccagcgtgattcccggagaactggtccgaggtcacatgcgcgagatgatcagcttc
ccagcgtggtttggcaagaactcctccacaaccaagcgacaccgcctgctgcgtgaactc
aagcatcatacgcacacacgagtgtccgctgaccgcacgcaattgtccatggactacgtc
gggcccttgttagactcgctgaccaagccactgatcgacaagggtgctgatggtgtgccg
agtgttgtgagccgcatgcatcactattacttgcagcgagccgatctggacaatctttgt
gacctggctttgtggccgggcatgaaagaccccatggcgaacatagactccaaggtaaaa
gctgctctgacacgtaccctgaataaggaagcctttatgaccccttattccaccggcgac
ttcgtcaaaaagaaggcaaagaaaggtgctggaaaatccgagaaactggctgcatcgcag
gacgatgaggaaaatgctgaagaagaggaagaggatgaggagcccgacccaacacttgtc
gattacgagtag
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integrated database retrieval system
