Rhipicephalus microplus (southern cattle tick): 119174863
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Entry
119174863 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rmp01009
]
119174863
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119174863
Protein phosphatases and associated proteins [BR:
rmp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119174863
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119174863
mRNA cycle factors
Stress granule specific factors
119174863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
119174863
NCBI-ProteinID:
XP_037281870
LinkDB
All DBs
Position
7:150122353..150154704
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AA seq
648 aa
AA seq
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MLSSGPSGECAPAEQEGPSPPSCNGEQPTTAVANNKEKKTPMCLVNELARFNKVGLQYRL
VDESGPPHKKSFTVVLRLAGHEEYQATGSSIKRAQHAAAQRALDETSLTRPVSRAPQRAQ
GPLTPTVELNALAMKRGELATYRVMELPRRAYMPPLNFQGMCHSPRGPCLYSPHYRHINA
APGGYCATLDVGPRRFHGEGPTEQAARHAAAQQALVQLRHLPLRPTPPQPAPGAATDADE
ASDELKSPVSLVHELALKRGLSVVFQVVQESGPPHMRTFRTRCTVGEISGEGEGNGKKAS
KKEAAQGVLEQLRKLPPIEPPPGSAVTSTGPGGVQLQKRRAPPKKRARNLVRDQQAATPP
CEVNPISRLIQIQQAKKEMEPTYVLVSERGDPRQREFVLQCKLGNLTAQGVGPNKKTAKR
LAAEAMLQRLGYSRPPPVNKATSGTGSAVDGVEQSPSSAASSAAAARGLMSPLSPRGGRQ
LVPGLLLVPSQGAGGAGPAGVGCSLAGGGAGSSTGNRLASAGDLQASSAIAKELLDKGVS
PTAEALRQTAPVTAAPVRPKQQLLYLAEVLGFQVQFTDFPKGNKQDFLSLVTLNTSPPQV
SHGAGSSLEASHDEAALAVLRTLAHRGLDTLGQPPAKDTPEPPLRLRQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctcgggtccgagcggcgagtgcgctccggcggagcaggaaggcccgtcgccg
ccttcctgcaacggggagcagcccactacggccgtggcaaacaataaagagaagaagacg
cccatgtgcctggtcaacgagctggcccgcttcaacaaagttggactccagtacaggctc
gtcgacgaatcgggcccgccgcacaagaaaagcttcaccgtggtgctgcgcctcgcgggc
cacgaggagtaccaggcgactgggtcaagcatcaagagggcgcagcatgcagctgctcaa
cgagccttagacgagacatctctgacgcggccggtgtcacgggccccgcagcgggctcag
gggcccttgacacccacggtggagctgaatgcactggccatgaagaggggcgagctagcc
acataccgagtcatggaactaccccgcagggcttacatgcctccactgaacttccagggc
atgtgccactcaccacgtggcccttgcctctactcgccacactaccggcacataaatgct
gctccgggtggttactgtgcaacactggacgtggggcctcggcgtttccacggcgagggc
cccacagagcaggcagcgcgtcatgcggcagcacagcaggcccttgtccagttgaggcac
ttgcccttgcggccgacacctccacagccagcaccaggcgcagccacagatgccgatgaa
gccagcgacgagctcaagtctcctgtcagcctagtgcatgaactggctctcaagcgtggg
ctctccgttgtctttcaggtggtccaagagagcggccctccacacatgcgcacctttcgg
acacgctgcacagtgggcgagataagtggcgaaggggaaggcaatggcaagaaggcttca
aagaaggaggccgcgcaaggtgtgctggagcagcttcgcaaattgcctcccattgagcca
cccccgggttcggctgtcacttcaaccggccccggtggtgtgcaactgcagaagcgcagg
gcacccccaaagaagcgagcccgcaacctggtgcgtgaccagcaggctgcaacgccacca
tgcgaggtgaaccccatatcccggctgatccagatccagcaggcaaagaaggaaatggag
cccacctacgtactggtgtctgagcgcggggaccctcgtcagcgggagtttgttctacag
tgtaaactgggaaacctcactgcccagggtgtgggacccaacaagaagactgccaagcga
ctggcagctgaagcaatgttgcagcgactgggatattcacgcccaccacctgtgaacaaa
gcaaccagtggtacgggttctgcagtggacggggtggagcagtcgccgtcttccgccgcc
tccagcgctgccgccgcccgtggattgatgtctccactcagcccccgaggtggtcgccag
cttgtgccgggtttgctgcttgtgcccagtcaaggggccggtggtgcgggcccagcaggc
gtgggttgcagtctggccggtggcggtgccggaagcagcactgggaaccgccttgcatct
gctggagaccttcaggcgagctcagcaatcgcgaaggaactgctcgataaaggtgtatcc
cctacggctgaagctctccggcagactgctcccgtgacagcggctccggttcgtcccaag
caacagttactctacctcgcagaggttctgggctttcaggtacagttcacagacttcccc
aagggaaacaagcaagactttctgtcgctggtgacgctgaacacgagcccgccacaagtg
agccatggcgctggctcctccctggaggcatcccatgacgaggctgcactggccgtatta
cgaacacttgcacaccgaggattggacacgctgggccagccgccggcaaaggacacaccc
gagcctcctctgcgtctgcgccaataa
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