Rhipicephalus microplus (southern cattle tick): 119174940
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Entry
119174940 CDS
T07403
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018
RNA degradation
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119174940
09123 Folding, sorting and degradation
03018 RNA degradation
119174940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119174940
03041 Spliceosome [BR:
rmp03041
]
119174940
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119174940
mRNA degradation factors
5'-3' decay
Lsm complex
119174940
Spliceosome [BR:
rmp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119174940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119174940
NCBI-ProteinID:
XP_037281972
LinkDB
All DBs
Position
5:17216973..17222605
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AA seq
96 aa
AA seq
DB search
MAASLEGYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSDHGVEQVPLGLY
IVRGDNVVVVGQVDDELDMRLDLANMRAEPLNAVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcgcttgaagggtatgtcaaccacacagtatcgataattactgctgatggt
cgtcacattgtgggcacactgaaaggcttcgaccagactattaacctaatactggacgaa
agccacgaacgtgtctacagctctgaccacggtgtcgagcaggtgccccttggattgtac
atagtgcgaggggacaatgtggttgtcgttgggcaggtggatgacgaattggacatgcgt
ctagacttggcaaacatgcgtgccgaaccgctgaatgctgtggttcactag
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