Rhipicephalus microplus (southern cattle tick): 119174997
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Entry
119174997 CDS
T07403
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119174997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119174997
03036 Chromosome and associated proteins [BR:
rmp03036
]
119174997
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119174997
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119174997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_WDR75_1st
Ricin_B_lectin
Beta-prop_NWD2_C
SGL
Motif
Other DBs
NCBI-GeneID:
119174997
NCBI-ProteinID:
XP_037282055
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All DBs
Position
7:162460814..162476788
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AA seq
323 aa
AA seq
DB search
MVQVNVKYAATKVNSVRFKPEGHGLLNRHEYCLVSGSWDDKPNTLSLWACSAKPSEDSPD
AGMRRVCTVELVSDTGDLCFAGTDILAAALSSGEVRLYRCSSSELQEQQRWSHLHPGYPC
TAISARGPQKLASVGEDGRLCLLTPGRPEALRIIEGANSGCPTCLSYVRQEHVIVGNLAG
HLQLWDLASPDRRPAQDLTWIGQQVTCLAQHQSQGHLVACGAASGQLSLWDLRQTRLATV
TLAAPTQGALADMVFDPEGSLLFCAHDGSLLCWNTPAAGQLRGEVEMDALVRPQGKPLNS
LDLQGPLVAAGSDSETLLLLSHS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggtaaacgtcaagtatgccgccacaaaggtcaacagcgttcgttttaagcca
gaaggtcatggtttgctaaacaggcacgagtactgtttggtttccggcagctgggatgac
aagccgaacacactgtccctgtgggcatgctctgccaagccgagcgaagattcccccgac
gccggcatgcgtcgtgtttgcacggttgagctggtctcggacacaggtgatctctgtttt
gcaggtacagacatcttagccgctgcactgtcatctggagaggtacggctctaccgctgc
agtagcagtgagcttcaggaacaacagcgatggagccacttgcatcctggctatccgtgt
actgccatttcagctcgtggcccgcaaaaactcgccagtgttggtgaggatgggagactg
tgcctgctcactcctggtcgccctgaggcattaaggattattgaaggagccaacagtggg
tgccccacgtgcctttcctatgtgcgccaggagcatgtgatcgtggggaacttggctggg
cacttgcagctttgggatttggcatcacctgacaggagaccagcgcaggacctcacatgg
attggccaacaggtgacctgtctggcacaacaccagagccaggggcacttggtcgcctgt
ggtgccgcaagtggccagctctccctgtgggacctgcgccagacacgcctagccacagtc
accctagccgcacccacccagggtgccctcgctgacatggtgtttgatccagagggcagc
ctgctgttttgtgcgcatgacggctcactgctgtgctggaatacacctgctgctggacaa
ctgcgtggtgaagtagagatggatgccttggttcgtcctcaagggaaaccactgaacagc
ctcgatcttcagggtcccctggtggcagctggttcagacagtgaaacccttctccttttg
tcacactcttag
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