Rhipicephalus microplus (southern cattle tick): 119175006
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Entry
119175006 CDS
T07403
Symbol
Srrm1
Name
(RefSeq) serine-arginine repetitive matrix 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119175006 (Srrm1)
03015 mRNA surveillance pathway
119175006 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119175006 (Srrm1)
03041 Spliceosome [BR:
rmp03041
]
119175006 (Srrm1)
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119175006 (Srrm1)
Spliceosome [BR:
rmp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119175006 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
119175006
NCBI-ProteinID:
XP_037282064
LinkDB
All DBs
Position
5:12894123..12961540
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AA seq
772 aa
AA seq
DB search
MTDAGFFRGTSAEQDNRFTDKQKKLLKQLRFHDVLNKRVDMTKVNLDTVKPWITKKITEL
LGMEDEVVVEFVFNQLEADKHPDPRMMQINLTGFLNGKNARDFMGEMWTLLLSAQETGGI
PAEILEEKKAEIRRRQEEQERMHDSARRAEEREREKMVDRAREAAAASLRDRSPEKPKER
PNHSEVKPREKPAEERPHRVFVEKELEPLPRRDVSEPRPKEKAPSPIVEVRKESTEKHRP
ESPRRQRTPPTKDRRRRSRSPRRSRSPRRRKSPHHGRHPSHHHRSPESHRHRRHRSESPA
GSISSSSSASSSSHGSVKKAKPEKRQAVSPLLEKLGQRKNSVQQKRHYRSQGQEESASSS
DESPTARRPPGDKPRGAGRRRGGRRRSGSASSSGSGASASPERRRQRPSPPRGRPYRSPS
PRLRHGHRRSMSPGRKHRPSPLPLREERRRMPSPPYERRPPPRSAMSPRREQRAMNQHSR
SRARRSRSPSEAVERYREVDARRQAHPQNSHHVSHQQRKRRAPVRSESSSSSSAEEPLPR
RKGAPPPDDESGSSSSSSEFTSPERPVKPPDYGGRRQHNSSPYRKKVPKEASPPPAKKNQ
PAGRDHDSSRERDVAEVRRPAPKQEPSRPERPEPESESESESSSEYEEVEVVAKSPPVSP
DRQSSKKIKKKRRRESESSDSEGSKKRRKRHKKHKKHRKHRKHRKSSRKSGEEEEEEDDD
GMTEERSEDENNAEEMERKLREKALRSLTKARRGSLSCDDSQESSTAVFVAN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccgggttttttcgcgggacgagtgcagagcaagataatcgcttcaccgac
aaacagaaaaagctcttgaagcaactgagatttcacgatgttctcaacaaaagggttgac
atgaccaaagtgaacctggacaccgtcaagccatggatcacgaagaagataaccgagtta
cttgggatggaggatgaagtcgtggtcgagtttgtttttaaccaactagaggcagacaag
catccagacccacggatgatgcagatcaacctgacaggcttcctgaatggcaagaatgct
cgcgacttcatgggtgagatgtggaccctgctgctcagtgcacaggagacaggtggcatt
cctgcagagatcctcgaagagaagaaggcggagatcagaagacgccaggaggagcaagag
aggatgcatgacagcgctagacgagcagaagaacgtgagcgggagaaaatggttgatagg
gcaagggaagctgcagctgcatctctacgagacagatcaccggagaagccaaaagagagg
ccaaaccattccgaggtcaagccaagggaaaagccagccgaggaaaggccacacagggtg
tttgtcgagaaggagcttgagcctctacctcggagagatgtgtcagagccaaggcccaaa
gagaaagctccatcaccaatagttgaagttcggaaagagagtacagaaaagcacaggccc
gagagcccacggaggcagcgcactccgccaaccaaagatcgacgtcgcaggtctcgatca
ccaagaagatcgcgcagtcctcgaaggcgcaagtccccacaccacgggaggcacccttca
caccatcaccgaagtccagagtctcataggcacagacggcaccgttccgagtctccagcc
gggtccatttccagttcctcatccgcttcaagttcaagccatggttctgtcaagaaggca
aaaccagagaaacggcaagcggtctctccgctgctagaaaaactgggccagcgcaagaac
tctgttcaacagaagcgccactatcgctctcagggccaggaggagtcggcaagcagctca
gacgagagcccgactgcccgaaggccacctggggataagccgagaggagctggacgcagg
cggggtggccgccgacgaagtgggtcagcatcgtcctctggctccggggcctcggcatca
ccagaaagacgtagacaacggccaagccccccacgtggcaggccttacaggagcccatca
cctaggctccgtcacgggcaccggaggagcatgagccctggcaggaagcacaggccatct
ccactgcctctgcgtgaggagaggcgtcgaatgccttcaccaccatacgaaaggagacct
ccgcctcgatcggctatgagcccacgcagggaacagcgggccatgaatcagcattcaaga
agccgtgccaggaggtctcgcagtccatcggaagctgttgagcgttatagagaggttgat
gcacgacgccaagcacatccgcagaacagtcatcacgtgagtcatcaacaaagaaagcga
agagctccagtgcgctcagaatcatcgtcctcatcatctgcagaggagcctctaccacgc
agaaaaggggcaccacctcctgatgatgaatcaggctcaagttcttcatcatcagagttt
acatctcccgagaggccggtgaaacctccagactatggtggccgacggcagcacaactca
tctccgtacaggaagaaggttcccaaggaagcgtcacccccaccggccaaaaagaaccag
ccagcaggcagagatcatgattcctcacgggagcgagacgtcgctgaagtgagacgacct
gctccaaagcaggagccctcaagaccggaaagacctgagcccgagtctgaatccgagtct
gagtcttcatcagagtacgaagaagtagaagtggtggccaagagccctcccgtctcacct
gacaggcagtcttcaaagaagatcaagaagaagcggagaagggaatcggagtctagcgat
tcggagggatctaagaagaggagaaaaaggcacaagaagcacaagaaacatcggaagcat
aggaagcacaggaaatcaagccggaaaagtggcgaagaggaggaggaggaggatgatgat
ggaatgactgaagagaggtcagaggatgagaacaatgccgaagagatggaacgaaagttg
cgtgaaaaagccctgcggtcgctgactaaggctcggcggggcagcctctcctgtgacgat
tcgcaagaaagctccacagctgtgtttgtagcaaactga
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