Rhipicephalus microplus (southern cattle tick): 119175025
Help
Entry
119175025 CDS
T07403
Name
(RefSeq) SR-related and CTD-associated factor 8-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119175025
03041 Spliceosome [BR:
rmp03041
]
119175025
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119175025
Spliceosome [BR:
rmp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119175025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
119175025
NCBI-ProteinID:
XP_037282089
LinkDB
All DBs
Position
7:complement(165060916..165171802)
Genome browser
AA seq
1826 aa
AA seq
DB search
MEVVKAFNSELTSLYEGKPPISKAKMTAITKSAIKGIKFYKHIVQSVEKFVQKCRPEYKV
PGLYVVDSIVRQSRHQFGQDKDVFAPRFTKNIHNTFQHLFKCPVEDRPKIVRVLNLWQKN
QVFPPHVIQPLLDMANPAAVPGGESAHSTEVVADTKANKNSMENWKSWSHGNSIPDSVHG
SGQETKTYALTQWLNQSEMPVPSKASEENLNLAMAAEAENAAPPDPELIVKLQSLASQLL
TNRPGGSSALEDKPPSQQPAAPAVKFNKKLLDFDYGDEEEEEEEDSFEETKATDFVEPPL
EDSGGQSSEPNAIALSMAQNLLNNPELLKQLQQMQQTLQQQSSEALRAQEAASSSVKSPP
PPTSTAPVHSSLPAETSVKHDGSGSQRLASPSLPPLPPASQLQTPNSSHAAVQQTTQLAN
APALVTPGYGGPPGAPVLAQVFQDTGALYPPVASMGGIGFGGVVEPTGGFAPLAAGPAPV
DEQPPTSASMETGAALPSYMSGGDLDERCGVVLGPGGRDMDLRTAGGGLPSPGRDRDRRR
HSRSRSPRRRGGRSRSRSPSRASGNRYSSTTKGDRSRERETRESAREKERERERERRRKG
FPPVKKNCLSVCSATLWLGHVPKSVSETDLHDTFGEFGAIVRIDMIPPRGCAYVCMDRRQ
DAFRALQKLKNLKLQGSLIKMAWAPGKGVKGKELKDFWEVDLGVSYIPLDKLPADVNLLA
LEEGGVIDKDSLSDGLKEKYAEQERQRGMSDPLAPTMLDMVQQQQQAPPSAEAMMAVAFP
PAVAAAGAPTAVAMVPPPVPQFSIPLPPVDQRSVKTNEAQIKSACMMPSQSLVMPQIQLP
MGVPPPPNHMLMVPPNTSQTLLGPSALGLLPPPLSLPGAALGLPPLHPPMSLPVTSQAAV
MPIVTTASPAVSSAPVTTVTQPVAAAAAPVSGSSATPATESETTDVPMAIDGDATPTDED
GTSEASRLGMIDPPSGEPGGNEKGPVESVKHDGSELATIAPSGGFLPLPAPPGLPGQFGN
HGLLAKDKVDANSVKEPKSPVAVSSHEAASTDVKTEKPEKTDLEKMQQDEQSSGQQAAEP
GQEVCAFDPSVSSVIPLPVGLPGMPSQPVPPRPFGNAPVRFSGPPPMFPFENPADGRPGM
EFPGPRMMGPDPRMVVPPVGDFCPPNPHDQAIMGGPGEQRMMGGPLEQHMLDGPPEANMM
GGLMEHRMHRGPEPRMMGGPLMGGPPEPRMMGGPEELRMLGGPPEHRMMGGPRDHRMMGG
PMQEPRMMGGPPDHRMMGGPPPHHRMMGGPPPGHRMMGGPPPDHRMMGGPPDHRLIGGPP
PDHRMMGGPPDHRMMGGPPPDHRIMGGPPDHRMMGGPPDHRMMGGPPDHRMMGGPPDHRI
LPGPPDHRMLRPPDFRLGGPPQDLRKLGPPEPRMPAPGLRMLAPNMPPNMPPNMPPNMPS
NMPPNMPPNMPPNLPPNMPPVIVTGVTDGKQTDVKGPESQEGTQNKPVELADKKRSENGE
APKEWKPPASAPEPSRGPNGPAAEEGQGNGEQPWKQPSGFGFFGPPRSRFNEQSSGRDSD
EGGFGGERGDRRVFTNAYGESSDRRRSSGRERRSRWSREDEERDRERSRSERSERDRSDR
ERSDRDRSDRRDRDRSKDRSDRDRDRERDHRDRSDRDRDRDRGDRDRSDRDRNDKDRDRS
DRDRDRSDRSDRDRDKDRDRDRDRDRDRSDRDRGDRDRSDKERSDRSDRSRGDHSRSRDR
ERSSHRSHSSPERAATATAETNGEVSNSKANGRSSTSEVPLPNVESKGPSSEVESKGSSF
NVESKGPAEPEAPKDSADHAKPEVKV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgttaaggccttcaacagcgagcttacctcgctgtatgaaggcaagcctccc
atctcaaaagccaagatgacagcgatcacgaaatcagcaatcaaaggaatcaaattctac
aagcacattgttcagagcgtcgagaagtttgttcagaagtgtcggccagagtacaaggtg
cctggactgtatgttgtggattcaattgtgcgccaatcacgacatcagtttgggcaggac
aaggatgttttcgcaccacggttcacgaaaaacatccacaacacatttcaacaccttttc
aagtgtccagtggaggacaggccaaagattgttcgggtacttaacttgtggcagaagaac
caagtgttcccgcctcatgtcatccagccactcctggatatggcgaatccagcagcggtc
cctggaggggagtctgctcacagcacagaagtggtagccgataccaaggcaaacaagaat
tccatggaaaattggaagagctggagtcatggcaacagcatcccagactcagtgcatgga
agtggccaggagaccaaaacttacgccctcactcagtggctcaaccagagtgaaatgcct
gtgcccagcaaggcatcagaagagaacttgaacttggccatggcagccgaggcagaaaat
gcagcacctcctgacccagaacttatagtgaaactccagagccttgcttctcagctgctg
acaaacaggccgggtggttcatctgcccttgaagacaagccaccaagtcaacagccagca
gctcctgctgtcaagttcaacaagaagctgctggattttgactatggtgatgaagaggag
gaagaggaagaggactcctttgaagaaaccaaggctactgattttgttgagccaccttta
gaggactctggtggtcaatcgtctgagcccaatgctattgcactaagcatggcccagaat
ctactcaacaaccctgagctgctaaagcagttgcagcaaatgcagcagacattgcagcag
cagtcgtcagaggcactgcgggcccaggaggccgcctcctccagcgtgaagtccccgccg
ccgccgacctcgacggctcctgtgcactcctccctgcctgcggagacctctgtgaagcac
gatgggagcggcagccagcggctagcgtcacctagtttgccaccactgcccccagcatcc
cagttacaaacgcccaacagcagccatgctgctgtgcagcagactacccagctggccaat
gcacctgcactcgtcacaccagggtatggcggtccgccaggagcccctgtacttgcgcag
gtatttcaggacactggtgccttgtaccctccggtggcatccatgggtggcattggcttt
ggtggcgtggtagaacccacgggaggttttgcgcccctagctgctggccctgctcctgtc
gacgaacaaccccccacatcggcatccatggagaccggtgcggcattaccttcatacatg
agtggtggcgacttggacgagcggtgtggtgttgtcctaggccctggaggccgtgacatg
gacctccgcacagcaggcgggggcctaccctctccaggacgtgacagggacaggcgaagg
cacagccgttcccggtctccacggaggcgtggtggccgctctcgttctcgatcaccatca
cgtgcttctggtaatcgctatagtagcacaaccaagggggaccgttcgagggagcgggag
accagggaaagtgccagagaaaaagagagggaacgtgagagggagcgacgccggaaagga
tttcctcctgtgaaaaagaactgccttagcgtttgcagcgctactctgtggcttggacat
gtaccgaagtcggtctctgagactgacttgcacgacacgtttggtgaattcggtgccatc
gtcaggattgatatgattcctccacgtggctgtgcctacgtgtgcatggaccgcagacaa
gatgcctttagagcattgcaaaaactgaagaatctgaaactgcaggggagcctgatcaag
atggcctgggcaccgggcaaaggtgtgaagggcaaagaattgaaagacttttgggaggta
gatctaggtgtgagctacattccactcgacaagctgcctgcggatgtcaacctgctagcc
ttggaggaagggggtgtgattgataaggattccctgtctgacggtttaaaagagaaatat
gccgaacaggagaggcaacgtggcatgtctgatccacttgctcccacgatgcttgacatg
gtacagcagcaacagcaggcgccgccatcggcagaagccatgatggcagtagcattccca
ccagcggtagctgcagccggggcccccaccgctgtggccatggtgcctccacctgtgccc
cagttcagcatcccattgccaccagtggaccaacggtctgttaagacgaacgaagcacaa
attaagagtgcatgtatgatgccgtcccagagcctggtaatgcctcaaattcagctaccc
atgggtgtgccacctccacctaaccacatgctgatggtgccaccaaacacatctcaaaca
ctgttggggcctagcgctctgggtctgcttcctccacccttaagcctgccaggggctgct
cttggcctgccccctcttcatcctcctatgagcctccctgtgacctcccaagcagcagtg
atgcccatagttaccacagcaagcccagctgtttctagtgctcctgtgacaactgtaact
cagccagttgctgctgcagcagcacctgtttcaggatcttctgcaacacctgccacagaa
agtgaaactactgatgtacccatggccattgacggtgatgccacccccactgatgaagat
ggcacaagtgaagcaagtcgtcttggtatgatcgaccctccttctggtgaaccaggggga
aatgaaaagggaccggttgagagtgtaaaacatgatggaagtgagttagcaacaattgct
ccttctggtggatttttacctttgcctgcaccacctggcctgccaggccagtttgggaac
catggtttgctggcgaaggacaaagttgatgcaaactctgttaaggagccaaaatctcca
gtggctgtatctagtcatgaagcagccagtacagatgtcaagactgaaaaacccgagaaa
actgatcttgaaaaaatgcagcaggatgaacaaagctcagggcagcaggctgctgagcca
ggacaggaagtttgtgcctttgacccctcggtaagctcagttatcccattgccagttgga
ctgcctggaatgccttcacagcctgttccacccaggccatttggaaatgcacctgtacgt
ttcagcggaccaccacctatgttcccctttgagaacccagctgatgggagacctggtatg
gaattcccaggtcctcgaatgatgggtccagatccaagaatggtggttcccccagtgggt
gatttctgtccgcccaatccgcatgatcaggccatcatgggtgggccaggggagcagagg
atgatgggtggacctctggagcagcatatgcttgatggacctccagaagcaaatatgatg
ggtggtctcatggaacacaggatgcacagaggtcctgaaccaagaatgatgggtggccca
ttgatgggaggaccacctgagccaaggatgatgggtggtccagaggaactacggatgcta
ggtggccctccagagcaccgaatgatgggtggtccacgagatcacaggatgatgggtggt
cctatgcaagaacctagaatgatgggaggtcctcctgaccataggatgatgggaggccca
cctccacaccacaggatgatgggaggcccacctccaggtcacaggatgatgggaggccca
cctccggaccaccgaatgatgggtggtcctccagaccataggttaatcggaggcccacct
ccagatcatagaatgatgggtgggccccctgaccacagaatgatgggaggaccgcctcct
gaccatagaataatgggaggccctccagatcataggatgatgggtggcccaccagaccac
agaatgatgggaggccctccagatcataggatgatgggtggaccaccagatcacagaata
ctgccagggccgccagaccataggatgctaaggccacccgactttagattaggtggtcct
cctcaagatttgagaaagttagggcctccagaacctcgaatgccagctcccggtctccgc
atgctagcccctaacatgcccccaaatatgccaccaaatatgcctccaaacatgccttca
aacatgcctcctaatatgcctcctaacatgcctcctaaccttcctcccaacatgccacct
gtgattgtgaccggagtcacggacgggaagcaaaccgatgtaaaagggcctgaaagtcaa
gaaggcacacaaaataagcccgtcgagttggctgacaaaaagagaagcgaaaacggagaa
gcgccgaaggaatggaaacctccagcttctgcgccggagccatctaggggaccgaatgga
ccagcagcagaagaggggcaaggcaatggcgagcagccgtggaagcagccaagtggtttt
ggtttcttcgggcctcctcggtcgaggtttaacgagcaaagttctgggagagatagcgac
gaaggtggattcggtggcgagagaggcgaccggcgtgtcttcacaaatgcatatggtgaa
agttcagacaggcgtcggagcagtggccgggagcgaagaagccgctggtcgcgggaagat
gaagagcgtgaccgtgaacggtcacggtcggagcgcagcgaacgagatcgcagtgaccgg
gagaggagtgaccgggaccgcagcgaccgtagggatcgggaccgtagcaaagaccgtagc
gacagggatcgcgacagggaacgagatcaccgagataggagtgaccgtgaccgtgacagg
gaccggggtgaccgcgatcgaagtgatcgggacaggaacgacaaggatcgggaccgtagt
gatcgggatagagaccggagcgaccgcagcgatagagaccgcgacaaggatagggaccga
gatcgggaccgcgaccgggacaggagtgaccgcgaccggggagacagggatcggagcgac
aaggagcgcagcgacaggagtgatcgaagcagaggggaccatagccgaagtagagaccgt
gagcggagctctcatagaagccacagctcgccggagcgggctgccactgcaacggcggag
acgaacggtgaagtgagcaacagcaaggctaacggtagaagcagcacttcggaagtgcct
ttgccgaatgtagaatccaagggcccctcctccgaagtggaatccaagggctcctccttc
aacgtggaatccaagggtcccgccgagccggaagcacccaaggactctgcggaccacgcg
aagcctgaggtgaaggtgtga
DBGET
integrated database retrieval system
