Rhipicephalus microplus (southern cattle tick): 119175118
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Entry
119175118 CDS
T07403
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03030
DNA replication
rmp03420
Nucleotide excision repair
rmp03430
Mismatch repair
rmp03440
Homologous recombination
rmp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119175118
03420 Nucleotide excision repair
119175118
03430 Mismatch repair
119175118
03440 Homologous recombination
119175118
03460 Fanconi anemia pathway
119175118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119175118
03032 DNA replication proteins [BR:
rmp03032
]
119175118
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119175118
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119175118
DNA replication proteins [BR:
rmp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119175118
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119175118
MMR (mismatch excision repair)
119175118
DSBR (double strand breaks repair)
HR (homologous recombination)
119175118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
119175118
NCBI-ProteinID:
XP_037282258
LinkDB
All DBs
Position
1:159839893..159857360
Genome browser
AA seq
598 aa
AA seq
DB search
MENRLTAGAVERILNNQQVDKPILQVLNFKPISSNTADRYRLLLSDGVQCHTYAMLGTQL
NGMITNNEIDKFAVVQLDKYMCNVVSPDKKVLIVLDLTVIAKGSTVGCRLGSPVIPTSSS
SGAAQPTDGGTNKAPLQQNNAAPSSFGNRAYPASTSDVVVVPIASLTPYQNRWTIRARVT
NKSNIRTWSNSKGEGKLFSMDLLDESGEIRATAFNAECDRYYDVIEVNKVYYISRAVIKN
VKKGYSFSSIKNDFEMSLISETTITPCDDVTPNIPTLQFNFVPISRLQEISKDSVIDVIG
VCKSASDLQTVTRRTTSQELKKRDVSLVDRSGTEVSLTLWGDQAEKFDGSDNPVVAVKGA
RVSDFSGVSLSLISSSMLQVNPDIPESHALMGWYSREGTLLQTHSLSNQRGGPMGGNSNW
KSIAQAKAEGLGQGDKPDYYSVKACVSIIRKENCLYKACPSENCNKKVIDLQTGYYRCEK
CAQETMEFKWRLLVSANLTDFSDGQWVTCFGKEAEMLIGASAEDLGEMYSNSSKEDSRFE
DTLNDVPFKPFIFRLRTKVEVYNDESRLKTSVMSVSPVDYVEYTKKLLKDIAELKKNL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgcctgactgctggcgcggtagagcgcattctcaacaatcagcaagttgac
aagcccatattgcaagttttgaacttcaagcccattagcagcaacacagctgatagatac
aggctgctgctgtcggatggtgttcagtgtcacacatacgccatgctgggcacacagctc
aacggcatgatcaccaacaatgagattgacaaatttgctgtggtgcagttggacaagtat
atgtgcaacgttgtcagtccggacaagaaagttctgattgtgctggacttgaccgtgata
gctaaaggctctacagtgggctgcaggctggggagccctgtaataccaacatcgtcatcc
tctggtgctgcacagcctacagatggtggaaccaataaggcaccacttcagcagaacaat
gctgcaccatcgtcatttggaaaccgggcataccccgcttctaccagtgatgtcgttgtt
gtccccattgccagcctcactccatatcagaacaggtggaccatcagagcgcgtgtcaca
aacaagtccaacattcgtacttggagcaactccaagggggaagggaaactcttttcaatg
gaccttctggatgagagtggagagatacgtgccacagctttcaatgctgagtgtgaccgc
tactacgacgttattgaagtcaacaaggtgtactacatttcaagagccgttatcaagaat
gtcaagaaaggctactcgttttcatcgataaagaacgacttcgagatgtcactcatttca
gagacaactattacgccatgcgatgacgttactccaaacatccctacacttcagttcaac
tttgtgcccatttcacgtctgcaggaaataagcaaggacagtgtaatcgatgtcatcgga
gtctgcaagtcggcgagcgacttacagacagtgacacgccgcaccaccagtcaggaactc
aagaagagggatgtgagccttgtggatcgaagtggcactgaggtgtctcttaccctctgg
ggagatcaggcagaaaagtttgatggctctgacaaccctgtcgtggctgttaaaggagca
cgtgtatcggacttcagtggcgtttccctctccctcatcagctcaagcatgcttcaggtg
aacccagacattccagagtcccacgccctgatgggttggtacagtagggagggaacactt
ctgcagacgcactccctttccaatcagagaggtggaccaatgggaggcaactcaaactgg
aagtcgatagcgcaggccaaggctgaaggcctgggccaaggggacaagccagactactac
agcgtcaaggcatgtgtgtcgatcatccgcaaggaaaactgcctctacaaggcctgtccg
agcgagaattgcaacaaaaaagtgatcgacctgcagactggatattaccgctgcgaaaag
tgtgcccaggagaccatggaattcaagtggaggcttcttgtttcggcaaacttgacagac
ttcagcgatggccaatgggtaacctgttttggcaaggaggctgagatgcttattggggca
tctgcagaggacttgggcgaaatgtactcaaattccagcaaggaggacagcagatttgag
gacacccttaatgatgttcccttcaagcctttcatcttccgccttcgcaccaaagtggag
gtctacaatgacgagagccgcttgaagacttccgtaatgtccgtttccccggtcgactat
gttgaatatacaaaaaagctgctcaaggacattgccgagctgaagaaaaacttgtga
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