KEGG   Rhipicephalus microplus (southern cattle tick): 119175857
Entry
119175857         CDS       T07403                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rmp03036]
    119175857
   03400 DNA repair and recombination proteins [BR:rmp03400]
    119175857
Chromosome and associated proteins [BR:rmp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119175857
DNA repair and recombination proteins [BR:rmp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119175857
SSDB
Motif
Pfam: MMS19_N MMS19_C TOR1L1_N HEAT_ECM29 HEAT_2 HEAT Cnd1 HEAT_DAAF5 Vac14_Fab1_bd HEAT_EZ HEAT_EF3_N HEAT_ULK4 DZR_2
Other DBs
NCBI-GeneID: 119175857
NCBI-ProteinID: XP_037282762
LinkDB
Position
8:34829413..34983832
AA seq 950 aa
MDESVFQDRDKFDEAVANYANAIKGNRDEFLRMLENMGHVLTHHDFQRRADGVRFLTTVI
SLLPQRFMNTYETAFAVQFFLRKLDDDNVVVMQAALRGLHELMINEHEMGDGEIKEIAEV
MLFQVPILGLHQAERYIAYRMLAYMLRNYHSALHNIDSEFVKSCIQVIDCETDPRCLLQV
FAIINMMCRNFILGELEESLFEVCANYFPIDFNPPARDEVGISREDLVEALLSCMIASAG
FGKHSIQLALEKLDSDLAVAKLDSLKLLIRGADVYPVICFKEMAVLIWRQIRNLVFVNRH
EDIIPRALDCLSSLSRVLSNQENTLRPFFKIIWKDLQQGAIPGMGRVLEAFIKPSAEACS
VALVEALPSILQLLSENEGHRRVLVLESTSNVLSHYAVLCNHQAATQELSQLLGLLADLL
CTLLTGGDDELASRAGVALCNALRIPDFLTESQLNIIKDLIIHVATHENAPALRNDHVML
LAAAACTARLPDIVWCIIREEIDRGLNSGQLERILEMITACAASPQSLSMLLPYLEDRFL
SSIRGIVIYNRNHLAKCLKGIIDVAELYGVSFDHKSLLDNTVVAWMETVKSGHTNENSES
FTHVAELLEKLSKKCSSSDMQKIIAYCEEACIDTSLADTSLLFLRCVVCHARPEALCATN
WHFMQQLIDAHCQRGGENVPQCLAGYVNKLPDTTLEETLGCLSLRLEPGWTVAKAELLLW
VTKALLLRGYPDLILCTTLLKELLKDENLGRPVAQGFKQILQPSVLTTEGHCTITLFHPQ
RFFVETVGFLIDGFYSATSEAVKNNFLMGLCYQLAYVPNAVVNACIDQILPILVTALSSE
EGSIIHECVLPCLTENVGLMASCLGSVLPQLLQLAKSSFSMEVRRSALECLLRLSSIEED
KLLPHQEKVVTSLTQCLADRKRIVREVAAQASSMWHMVGESRGVQNPMLL
NT seq 2853 nt   +upstreamnt  +downstreamnt
atggacgaatctgtatttcaagacagagataagtttgacgaggcagtcgccaattatgcc
aacgcgatcaaaggaaaccgagacgaatttcttcgcatgctagaaaatatggggcatgtt
ttgacacaccatgacttccaacgaagggccgatggtgtgagatttttgacaacagtgatc
tctttacttccgcagaggttcatgaatacatatgagacggcatttgctgtccaattcttt
ctgaggaagctcgacgacgacaacgttgtagttatgcaggctgccttgcgaggtcttcac
gagctgatgatcaatgaacatgagatgggtgatggtgaaatcaaggagattgctgaggtc
atgctctttcaagtaccaattcttgggcttcaccaagctgaacgttacattgcttacagg
atgctggcttacatgctgcgtaattatcactcagctctgcataatatagatagcgaattt
gtcaaatcttgcattcaagtcattgactgtgaaacagacccacgatgtctcttgcaagtg
tttgccataattaatatgatgtgcagaaacttcattttaggtgaactagaagaatcgttg
tttgaagtatgtgcgaactattttcctattgacttcaatcctcctgccagggatgaagtt
gggattagccgggaagatctggttgaagccttgctctcatgcatgattgcttcggctggt
tttggaaagcacagcatacaactggctttagaaaagctagattctgatctagctgttgcg
aagttggactcactaaaacttttgatccgtggagctgatgtttatcctgtcatctgtttt
aaggaaatggcggtgctcatatggagacagatacgcaacttggtgtttgtgaatagacat
gaagatatcattcccagagctcttgattgtctttcgagtctttcaagagtcctctcgaac
caagaaaatacattgagacctttcttcaagattatttggaaagacttgcaacaaggtgca
atccctggcatgggcagagtgttggaagcatttataaaaccgtctgcggaagcctgctcg
gttgccctcgtagaagcgctgcccagtatactccagcttctgtcagaaaatgaaggtcat
aggcgagtcctggttcttgaaagtacaagcaatgtcctgtcgcattatgcagttctatgc
aatcaccaagcagcgacacaggagctgagccagttgcttggcttgctggctgacttgctg
tgcactctgctgactggcggcgatgacgaactggcatcacgggcaggtgtagcactttgc
aatgctcttcgaattccggacttcttgacagagtcacagctgaacatcataaaggaccta
ataattcatgtggcaacacatgagaacgctcctgcactacggaacgaccacgttatgctg
ctggctgcggctgcctgcacagctcgtctaccggacatcgtgtggtgcatcataagagag
gaaattgacagaggtttgaacagtggccagctggaacgaatcttggaaatgatcactgca
tgtgcagcaagcccacagtctctgtctatgctgctaccttaccttgaagaccgttttctg
tcttctattcgtggcattgtgatctataaccggaaccatctggcaaaatgcctgaaagga
ataattgatgtagcagaattgtatggagtgagttttgatcacaagtcattattggataac
actgtggtcgcctggatggagacagtgaaaagtgggcatacaaatgagaattctgaaagc
tttacacatgttgcagagctgttggagaaactttccaagaagtgcagcagcagcgatatg
cagaagatcattgcctactgtgaagaagcatgcatagacacgtcacttgccgacacttca
ctccttttcctgaggtgtgttgtgtgccatgcacgtccagaagccctatgtgccaccaac
tggcacttcatgcagcagctgatcgatgcccattgccagcgtggaggtgaaaatgtccca
cagtgcttagctggttatgtgaacaagttgccagatacgactctagaggagaccttgggc
tgcttgtcgctgcgccttgagcctggatggacagttgcgaaggctgaactgctgttgtgg
gtgaccaaagcacttctattgagggggtacccagacctcattctctgtacaacgttgctg
aaagagcttctgaaagatgaaaacttggggaggcctgttgctcaaggctttaaacaaatt
ctgcaaccgtcggtcctgacaacggaaggacactgcactataacgctgtttcatccacaa
cggtttttcgtggaaacagtgggctttctaattgacggtttctacagtgccacaagcgaa
gccgtgaagaataattttcttatgggcctttgctaccagctcgcatatgttcctaatgca
gtggtcaacgcatgcattgatcagatcctaccaatcttggtaactgccctgagcagtgaa
gagggatccataatacatgagtgtgtgctcccctgccttacggaaaatgtagggctgatg
gcttcctgtcttggctcagtgttgccacagctgctgcagctggcaaagtcatcattttca
atggaagtccgccggtccgctctggaatgcttgctcagactgtccagcatcgaggaagac
aagctgctgccccaccaagagaaggtggtgacaagcctgacgcagtgcttggcagatcgc
aaacgaattgttcgtgaagtggcagctcaggcatcttccatgtggcatatggttggagaa
tcaagaggcgtacaaaatccgatgttgctgtaa

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