Rhipicephalus microplus (southern cattle tick): 119175879
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Entry
119175879 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119175879
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
90S particles
Other 90S particles
119175879
Pre-60S particles
Other pre-60S particles
119175879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TOR1L1_N
SpoIIE_N
MOR2-PAG1_C
DUF6662
DUF7570
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
119175879
NCBI-ProteinID:
XP_037282795
LinkDB
All DBs
Position
8:36857595..36958991
Genome browser
AA seq
1260 aa
AA seq
DB search
MSGKRSGARGFKRPLSVRTKTIKVRKGQSSSVNPSKRKFRNEAKSQVFGAFPLKDQGGGR
LTAENLQQHNGCAYESDAGDKLGIAETESNYSAESDCSLGSVMTKNRLLQTWDPTSELHK
EMLAMYNASTDIIKSKGGQQTDTEYFAVLMTTIETVDSDISRTSAAALLSIFAKRVPAAV
LRMKFSWITTMCINFMQLYSQPTHVVLLRNLLGLLTSCLKSLDLATWSQSSTLQVFSFMF
PYIIHIRPKLRKLAQKLICSILMSSSIMLAPDAPPTHPVVPALSSFCLPIIKSSAATSFP
VSTLHIFGFFKLVLHLFPQAEVKTACEAVLQVMGAGHPTVVQCGLVMLQSFFASRPRPAV
TLSPQLNAQLVNALYDYKPGVQDPKLLDVWLVTVQEALANLQSSSDELFLSNLPKFVGVA
IESWLSGRSETYGTASTVIMTLLKQSFQACLDKEVKQSSTSTLCHSTGTKVVEQMQRALQ
YQFVFAQDQVLLTWATCFEVLGKKCGKDMLEPLRTMAEWRESPKHSNKALVDRTIAAAIK
AMDPELVLQAIPLNMSGDKCQDFQRSWILPLLRDNLRSTRISLFTNNFLPLACAFHVLGE
ASDKPESLTKAYQILEKQIWSLLPGICTSPADCIESFPKIAKTLGNNLSNRSDLRLDIMS
ALRRLISSNILNDDGDPEMSRYAKNFLPILFNIYTSESSSQCEEGIRLAAFDTIKAFVEI
ADGKLCDTLFCTAYEKATDDTSHSKHAILDLARSLVCKIGHENVERLYKLGKDNIENSDH
RVQKKAYRVIEEICHCPTTVCKEFIESHVGELTECLQDSLQGICMGSRAPRLRCLVLVLA
KLSVEHKSFAWKALNEAVLCTKVPASKVQQAAYEVIASVGKALIRWQPDDPGEAVTELVV
RLTKGLLGRTYLLSSCIMALSFALYEFKDVCRSDMLNAVIKSVMNVLESGKREVVKAALH
FVQMLFFILTPEHLKEHLSELIPKLGSMTEDCQKHFRRKIREILVKLIRKFGYDSIIELL
PESHRKLAVNIRKVENRKKRNKDKKSREYQAKDKPEGDGASSSGILRRPATEGIEQICWT
AVKMNPTIVMKMFQQVGEARRLHLWIEERGEDDIVDFLDKSAGKQILSTDPKALPKKKKK
CPFETTKDGRLLILDLEAGKAEQDELSSEAEEAVNDLLEIMTDHKTKKRNAPSNSDGEGT
SGAGEGAASGAGPSKKKKTRKTSDEDPRKSKFEPYAYLPLNRKQLNKRSKKTSTAFKGVL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaagaggagcggtgctagaggctttaaaaggcccttaagtgtaaggaccaaa
acgatcaaagttcgcaaaggccagagcagtagtgtgaacccgagtaaacggaaatttcgt
aacgaagcgaagagccaagtgttcggagcgttccctctcaaagaccaaggcggtggtaga
ctgacagcggagaatcttcagcagcacaatggttgtgcctacgaaagcgatgcaggggac
aagcttggcattgctgagactgaaagcaattactctgctgagtctgactgtagtcttggc
tctgttatgacaaagaacagattactacaaacgtgggacccaacttcggaactgcacaaa
gagatgttggcaatgtacaatgcatcaactgacatcataaagtccaaggggggtcagcag
actgacacagagtactttgctgtccttatgacaacaatagaaactgttgattctgatatt
tcgaggacatcagctgctgctcttctatcgattttcgccaagagagtgcctgctgctgtt
ctcaggatgaagttttcttggattacaacaatgtgcataaacttcatgcagttatattca
cagcccacacatgtcgtcctgcttcgcaatctgctgggcttgctcacttcctgcttgaag
tcattggacctggccacatggagtcagtcatctactctgcaagttttcagcttcatgttt
ccatacatcattcatatcaggcctaagcttcgaaagcttgctcagaagctgatctgcagc
atcctgatgagcagcagcatcatgttggcacctgatgcaccaccaacacatcctgtagta
cctgccctcagttccttctgccttccaatcataaagtcatcggcagcaacgtcctttcca
gtttcaacgctgcacatcttcggctttttcaaactggtgctgcacctgtttcctcaggca
gaagtcaagactgcatgtgaagcagtgctacaagtcatgggggctggccaccccactgtt
gtgcaatgtggcttggtcatgttgcagtctttctttgcttcaaggccacgtcctgctgta
acattaagcccacagttgaatgcccagttggttaatgcactgtacgactacaagcctggt
gtgcaagatcctaagctgttggatgtgtggcttgtcactgtacaagaagcattggcaaac
ctacaaagttcatctgatgaactattcctaagcaaccttccaaagttcgtgggggttgct
attgaaagctggctcagtggaaggtctgagacctatggcactgcctcgacagtgattatg
acattgcttaagcagagctttcaagcctgcctggacaaggaggtaaagcagagttctaca
agtacgttgtgccactctactggtaccaaagttgtcgagcagatgcagcgagcgctgcag
taccagtttgtgtttgcacaggatcaggtgcttttgacatgggctacttgctttgaggtc
ctcggcaagaaatgtggaaaggacatgcttgagccattgcgcactatggcagagtggcgt
gaatctccgaagcactcaaacaaggctctggtagacagaactatagcagctgccatcaag
gccatggatcctgagcttgttttgcaagccataccactgaatatgagtggagataagtgc
caggacttccaaaggagttggatcctcccacttctgcgggacaatctacggtccacacgg
atatctttattcactaataactttctcccactagcttgtgctttccacgtgttgggggaa
gcttcggacaagcctgaatctcttaccaaggcttaccagatattggaaaaacaaatttgg
tcacttttgcccggcatctgtactagtccagcagactgtatcgagtcctttcccaagatt
gccaaaacacttggcaacaacttgagtaatcgatcggatctgaggcttgacatcatgtct
gctctgcggcgcctcatcagcagcaacatcttgaatgatgacggtgatccagagatgtct
aggtatgcaaagaactttctgccgatcttgttcaacatctacacaagtgagtcatcatca
caatgtgaggaaggaatccgcctagccgcttttgacaccatcaaggcatttgttgaaatt
gcagatggaaagctttgtgatacgcttttctgcactgcatatgaaaaagcgacagatgat
acttctcacagcaaacatgccatattagacctggcaagatccttagtctgcaaaattggt
catgagaatgttgaacgtctgtacaagctaggcaaggacaacatagagaactctgaccat
cgagtacaaaaaaaggcataccgtgtcattgaagaaatttgccattgcccaactactgtt
tgtaaggaatttattgaaagtcatgtcggagaacttactgaatgtctccaggatagcctg
cagggcatatgcatgggatcaagagcgccccgccttcgttgtttggtccttgtgcttgct
aagctgagtgtggagcacaagtcttttgcgtggaaagctcttaatgaggcagtgctgtgc
acaaaagtgcctgcttctaaggtgcagcaggcagcctatgaggttattgcaagtgtgggc
aaggcactgatccgttggcagccagatgatcctggagaggctgttacagagcttgtggtc
cggctcacaaaaggtttattaggtcgtacctacctactgagctcctgcatcatggccctt
tcatttgccctctacgagttcaaagatgtctgccgcagtgacatgctgaatgctgttatc
aaatctgtaatgaatgtcttggaatcggggaagcgggaggtggtgaaggcagctcttcat
ttcgtgcagatgctatttttcatcctcactcctgaacatctgaaagaacatttaagcgag
ctgatcccaaagttgggctcaatgactgaagattgccagaagcatttccgaaggaagatc
agagagatcttagtcaaattgattcgaaagtttggctatgacagcatcattgaactgttg
ccagagtcccaccggaagttagcagtcaatattcgtaaggttgagaatcgaaagaagcga
aataaagataagaagagcagggagtaccaggcaaaggacaaacctgagggcgatggggcc
agcagctcgggcatccttcgtcgacctgccactgaagggattgagcagatctgctggaca
gcagtgaagatgaatccgacaatagtgatgaagatgttccagcaagtaggagaagcaaga
aggctgcatctgtggattgaagagcgaggagaagatgacattgttgacttcctggacaaa
tctgctggaaagcagatactgtctactgacccgaaggcactgccaaaaaagaaaaaaaaa
tgtccgtttgaaacgacgaaggatgggcgacttcttatactggacctagaagctggaaaa
gctgaacaagatgagctatcaagtgaagcagaagaggcagtgaatgatcttttggaaata
atgaccgaccacaagacgaaaaaacgtaatgcaccttccaattcagatggagaaggtaca
tcaggagcaggagaaggagcagccagcggtgctggaccttccaaaaagaaaaaaactcga
aagacatctgacgaggatccaagaaagagcaagtttgagccctatgcatacctgccattg
aaccggaagcagttaaacaaaaggtccaagaagacatctacagcattcaaaggagtgctc
tga
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