Rhipicephalus microplus (southern cattle tick): 119175949
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Entry
119175949 CDS
T07403
Name
(RefSeq) UV-stimulated scaffold protein A-like isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119175949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119175949
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
119175949
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
DUF3384
Adaptin_N
GFRP
Motif
Other DBs
NCBI-GeneID:
119175949
NCBI-ProteinID:
XP_037282902
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Position
8:complement(46490794..46516166)
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AA seq
607 aa
AA seq
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MAQLNSELCKVIDTLTSSAAAHVKKECMSKLKLLCRSSDCLLREACDLLKERLEENDADV
RLDTLAVIHELFTRSHLFRTLILEDFQKILELLVETNPDLPLPGTPAQAKNLKTKSLETI
EKWNEKFGPSYKILSLAVEYLKTCKQKVQKMEEQPAWSRRLLSEISERTPDVQLIVTQIE
NCFRLLVPSEAEEDASKESVSAIDPLPGTSLAERLRDHAVPLTFSMEIEVSRKVNVLKTA
DNEEVLDTLRRLHKELMETFFPVVKKWLKGLAKFDHPMEVMRNTIDLKHRIEIVHEKFGD
LNVGSEESSDSELEEVPEKEGFEPVVPVARRAEYGLGPVEKKLKVKTPDKAAHPKEPHEL
SDPTSREAQLRRLNKLLSSECSSNNGNPSGKIVPSINISCRDLEEAGPSTSNNAPVRNID
LDLIYWEQEKIEKEGGSGFSDLNCVWKGTSKDDNVQAQDLPFRERCIEFSGKFEPVKWTC
RAPLPSGKLCPRRDRLKCPLHGPIVARDDLGNPRDSSVVQPTQCVPEWQDPQLLRDLEAA
TGVQLHVGRPVRKQHTRRGPVSTARMRLEKKIFNKRAAKRVAESMDAVDSKKFQEKFGHQ
WNYALGT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttaaattcggagttatgtaaggtcatcgacacgcttacatcttcggcagcg
gcacatgttaaaaaggagtgcatgtcgaaactgaagctattatgtcgttcgtctgactgt
ttattgagggaagcctgtgacctgctaaaagaaaggctggaggaaaacgatgccgatgtt
cgtctagacacgcttgctgtcattcatgaactgttcactaggtcgcacctatttcggacg
ttgatcttggaagactttcagaagatcctcgaactgcttgtcgaaacaaacccggacttg
ccgcttcctggaactccagcacaggccaagaacttaaagacgaaatcattagaaacgatc
gaaaagtggaacgagaaattcgggcccagctataaaatactttcccttgccgtggaatac
ttgaagacttgtaagcagaaggtgcagaaaatggaagagcagcccgcctggtctcgaagg
cttctttccgagatttctgagcggacaccagatgtgcagctgattgtcacgcaaatagaa
aactgctttcgactattagtgcccagtgaagcagaagaagacgcaagcaaggaatctgta
tcggctatagatccattgccaggaacatcattagccgagcgtcttagagatcatgcagtg
cctttgacattcagtatggaaatagaagtgtcacgaaaggtgaatgtgctgaagacagca
gacaatgaagaggttttggataccctgagacgacttcacaaagagttgatggagacattc
tttccagtggttaaaaagtggcttaaaggtctggccaagtttgaccacccaatggaagta
atgaggaacacaattgacctcaagcatcgcattgaaattgtgcatgagaagtttggagat
ttaaatgttggatctgaggagtcgtctgacagtgaacttgaagaggtgccagaaaaagaa
ggctttgaacctgtggttcctgttgcacgacgggcggagtacggtcttgggccggtagag
aaaaaactaaaagtaaagacaccagataaagctgctcatcccaaggaacctcatgaactg
tctgacccaacctctagagaggcacagcttcgaaggctcaacaagttgcttagcagtgaa
tgcagcagtaacaatggtaatccgagtggaaagatcgtgcccagtattaacatttcttgc
agagatctcgaggaggctggtccaagcacatcgaacaatgctccagtgcggaatattgac
ctagacttgatttattgggaacaagaaaagattgaaaaagaaggaggcagtggcttcagt
gacctgaactgtgtctggaaggggacctccaaagatgataacgtgcaagcacaggatttg
cctttccgggaacggtgcattgaatttagtgggaaatttgagccagttaagtggacctgc
cgtgcaccacttccaagtggcaaattgtgtcctcgacgtgatcggctgaagtgccctctg
catggccctattgttgccagggatgatcttggcaacccgcgggactcgagcgtagtgcag
ccaactcaatgtgttcctgagtggcaagatccccagctgctccgtgacctcgaggctgcc
acaggtgtccagctccatgtaggtcgaccagtgcggaagcagcacacccgtcgcggtcca
gtaagcactgctaggatgcgccttgagaagaaaatttttaacaagcgagcagcgaaaaga
gtggctgagtcgatggatgctgttgacagcaagaagttccaggaaaagtttggccatcag
tggaattatgcattagggacatga
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