Rhipicephalus microplus (southern cattle tick): 119176042
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Entry
119176042 CDS
T07403
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119176042
03015 mRNA surveillance pathway
119176042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119176042
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119176042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
119176042
NCBI-ProteinID:
XP_037283053
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All DBs
Position
8:55017067..55086382
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AA seq
428 aa
AA seq
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METSQVPCLQLVRGALAPDLEDGHGVTADSLDSPGRIEPYSDQEDFDGEIVLHPRLHRGD
LDDDSGINTGTRGLEDELEECLDEEDDDEDCLKGERQQDEGKENVDPSDLQDKVLDFDED
KRYPQYIPKKGAFYQHDDRVVGDEDSSEVPEEKTEDDTGSRRPKKLWHEEGVWDHDMYRE
EEQGPKSSEELVSIYGYDIRSELMPPGAQRRQHYGSRPNKYEHSWEGEEAYTPQSGSGRG
EGACGGRSTRAGSHLGNPGFYDEDFADLHSKPSENAATMQQNRGEVKSSDRPAGFEGSDW
TGSNSSQQEKWDHTVKGSGMTHWGWGKRPSLPSRAVPDAPPKQQDCDVKEDVPLGHRVSS
PAPQLPVMAVEVPQVSRTAGRSRAIQHLLSKDDQSKREHEALKELAAKGELQGGSCCKKG
IPQQSDPQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctcaagtaccgtgtctacagctggtgaggggggcactggcacctgatttg
gaagatggtcatggggtcaccgctgactccttagacagtccaggccgcatcgaaccttac
tctgatcaagaggactttgatggagaaattgtattgcatccacgattacacaggggtgac
ctagatgatgatagtggcattaacactggcacacgtggcttggaagatgagctagaggaa
tgtcttgacgaggaagatgatgatgaggattgtctcaaaggagagaggcagcaggacgag
ggcaaggagaatgttgatccctctgatctccaagataaagttttggactttgatgaagac
aagcgctaccctcagtacatccccaagaaaggtgcattttaccagcatgatgaccgagtg
gtaggagatgaagattcatctgaggtaccagaagaaaaaactgaagatgacacgggctct
cgccgaccaaagaagctctggcatgaagaaggtgtttgggaccatgacatgtatcgtgag
gaggagcagggacctaaatcaagtgaggagcttgtgagcatatatggctacgatattcgt
tcagaactgatgcctcctggagctcaaagacgtcaacactatggtagtaggcctaacaaa
tacgagcacagctgggaaggtgaagaggcttacactccccagtcagggtcaggacgcggt
gaaggagcatgtggtggtcgcagcaccagggctgggagccaccttgggaaccctggattc
tacgatgaggacttcgccgaccttcactcgaagccctccgaaaatgccgccacaatgcaa
caaaacagaggagaagtaaagtcgtcagacaggcctgcagggttcgaaggctcagactgg
acagggagcaacagttctcaacaggagaaatgggaccatacagtaaagggttctggaatg
acccactggggttggggcaagcgtccttctctaccttccagggcagtaccagatgcacca
ccaaagcagcaagactgcgacgtcaaggaggatgtacccctagggcatcgtgtcagcagc
cctgcaccacagttgccagtgatggctgttgaagtgcctcaagtttcacgtactgctggc
agaagtcgagctattcagcatctgctgagcaaggatgaccaaagcaaaagggagcatgag
gcactcaaggagcttgctgctaaaggagagcttcagggtggttcctgctgcaaaaaaggg
atcccccaacagagtgacccacaatag
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