Rhipicephalus microplus (southern cattle tick): 119176169
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Entry
119176169 CDS
T07403
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39-like protein Caper isoform X3
KO
K13091
RNA-binding protein 23/39
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119176169 (Caper)
Spliceosome [BR:
rmp03041
]
Common components
Common spliceosomal components
General mRNP proteins
119176169 (Caper)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_10
RRM_PARP14_3
Nup35_RRM_2
F07F6_N
Motif
Other DBs
NCBI-GeneID:
119176169
NCBI-ProteinID:
XP_037283223
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Position
X:complement(83111798..83199191)
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AA seq
498 aa
AA seq
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MADDLDVEALLEAPYRKEEVNGAGSLHQASSSGEGTKGSADKENRHGSSSKKRRSRSRSR
SRGHGRHRSRSRGRDKRRSRSRSRERRRRRSRSPGRRRGPPLPPRPRSRSRSRDRRRRRS
ISPRRRGLDDITPEERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLIMDNKTRRSK
GIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQSASTSNSTLQRGNVGP
MRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALE
QLNGFELAGRPMKVGHVTERTDVSQAPSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGF
QIPQAAVNALQMNPAILPGQPQAAAVAAAAAPTIATQCFLLSNMFDPLTETNPSWDEEIR
RDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNALHGRWFAGRIITAAYVP
VVSYHTLFPDSATTTALL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaccttgacgtggaggccttgctggaggcaccttatcgaaaggaggaggtg
aatggtgcagggagccttcatcaagcaagttcatctggagaaggcactaaaggctcggct
gacaaggagaacaggcatggtagcagcagcaaaaaaaggcgcagtagaagccggagccgg
agccgaggtcatggacgtcacagaagccgaagccgtggcagggataagcgtcgttccagg
tcccggtctcgagagcgaaggcggcggcgttcgcgcagccctggacgtcgacgagggcca
ccgctgcctccccgaccgcgaagccgaagtcgcagccgagacagacgaagacgacgttct
atttcaccgaggcggagaggcttggatgacattacacctgaagagcgagacatgcggacg
gtcttctgcatgcagctttctcaacgcattcgtgcgcgggacttggaagagtttttttca
tctgtaggcaaggtccgagatgtacgtctgatcatggacaacaagactcgcaggtcaaaa
ggcattgcatacgttgaatttcaagatgtggagtctgtaccattggccatgggattgaat
gggcagaagttgtttggaatccccattgtggtgcagccaacacaagcagaaagaaaccgg
gctgctgcacaaagtgctagtacaagcaacagcactttacaacgaggaaacgttgggcca
atgcgcctctatgttggctcgttgcatttcaacattactgaagaaatgctcaagggcatt
ttcgaaccatttggcaaaatagacaagatagagctcatcaaggatatggagaccaaccgc
tccaagggctatggtttcatcacattccatgactcggaagatgcaaagaaggctttggag
cagttgaatggctttgaactagcgggcagacccatgaaagtaggccatgtaacggaacgc
acagatgtgtctcaggcacccagcttcttggacagtgaggagcttgaccgaagtggcatt
gacttgggtgctactggacgtctccagctgatggccaaacttgcggaaggcacagggttc
cagataccccaagcagcagtgaacgcgcttcaaatgaaccccgcaatcctgccaggacag
cctcaagcagctgctgtggcagccgcagctgcaccaacaatagccacgcagtgtttcctc
ctgtccaacatgttcgatcctttgactgaaacaaatccttcttgggacgaggagattaga
cgagatgtaatagaggagtgccgcaagcatggtggagctctacatgtctacgtagatcgg
gcatcacctgagggacacgtgtacgtcaagtgcccaaccattgcctcagcagtagcctct
gtcaatgcgctgcatgggcgttggtttgctggccgaatcattacagcagcatatgtccca
gtcgtgagctaccacactcttttcccggactctgcaacgacaactgccctgttgtga
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